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SCNpilot_cont_500_bf_scaffold_31167_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 1338..1907

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator HexR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ES79_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 187.0
  • Bit_score: 308
  • Evalue 4.10e-81
Transcriptional regulator RpiR family {ECO:0000313|EMBL:EYR81708.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 187.0
  • Bit_score: 308
  • Evalue 5.80e-81
transcriptional regulator, RpiR family similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 187.0
  • Bit_score: 222
  • Evalue 1.60e-55

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGGATCTCTTCCACGCCCTTTCAGACGAAGACGGCCGGCTTGCCGGCCTGGACAAGAAGCTCGCCCATCTCGTGCTGAAGGATGTCGAGGCGGTGATGAATGCCTCGATCAGCGAGCTTGCCGAGCGCGCCGGCGTTTCCCCGCCCACGGTGACGCGCTTCTGCCGGCGGCTCGGCTGCCAGGGCTATTCGGATTTCAAGGTGCAACTGGCGAAGATGCCCTATGTCGGCCTGCGTTACCTGGTGCCGGAGACGCCAACCGCGACACCGGAAGAAGTCGCCGAGGATATCGTCGCCAAGGCGCAAAACGCGCTGTTCCAGTTCCATCGCCAGATCGATCTCAAGGCGATGAACCAGGCCGCCCACCTGCTGCGCGGTTCCGAATTCATCTATGCCTTCGGCGCCAGTGGCAATTCGGCGATGATCGTCAACGAGTTGCATAATCGCCTGTTCCGGCTGGGCTGCCGCATCAATTCCTCCAACGATCACAACATGAACATCATGCTTTCCGCCTCCGCGCTGCCCGGTACGGTGGTCTTCGCCTCTTCCTTTACCGGCCGTGCCCTCGGC
PROTEIN sequence
Length: 190
MDLFHALSDEDGRLAGLDKKLAHLVLKDVEAVMNASISELAERAGVSPPTVTRFCRRLGCQGYSDFKVQLAKMPYVGLRYLVPETPTATPEEVAEDIVAKAQNALFQFHRQIDLKAMNQAAHLLRGSEFIYAFGASGNSAMIVNELHNRLFRLGCRINSSNDHNMNIMLSASALPGTVVFASSFTGRALG