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SCNpilot_cont_500_bf_scaffold_32879_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1302..1568)

Top 3 Functional Annotations

Value Algorithm Source
glycosyl transferase family 1 n=1 Tax=Rhizobium radiobacter RepID=UPI00036BA28F similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 88.0
  • Bit_score: 175
  • Evalue 2.60e-41
ABC transporter permease {ECO:0000313|EMBL:EMS99542.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 88.0
  • Bit_score: 175
  • Evalue 3.60e-41
ABC transporter permease; K06158 ATP-binding cassette, subfamily F, member 3 similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 88.0
  • Bit_score: 173
  • Evalue 2.30e-41

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGGCGCGCATGCTGTTCGACCCGCCGAATTTCCTCGTCCTCGACGAGCCCACCAACCACCTCGACCTCGACACCAAGGAAATGCTGATCAAGGCGCTCAGCGATTTCGAGGGAACCATGCTGTTCGTCTCCCACGATCGGCATTTCCTCGCAGAGCTGTCGAACCGCGTGCTGGAACTGACGCCGGACGGTATCCATCAGTACGGCGGCGGCTACACCGAATATGTCGAGCGCACCGGGCAGGAAGCGCCGGGCCTGCGAAGCTAG
PROTEIN sequence
Length: 89
MARMLFDPPNFLVLDEPTNHLDLDTKEMLIKALSDFEGTMLFVSHDRHFLAELSNRVLELTPDGIHQYGGGYTEYVERTGQEAPGLRS*