ggKbase home page

SCNpilot_cont_500_bf_scaffold_31262_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 618..1901

Top 3 Functional Annotations

Value Algorithm Source
TP901 family phage tail tape measure protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0H820_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 424.0
  • Bit_score: 538
  • Evalue 5.50e-150
  • rbh
Phage tail tape measure protein, family {ECO:0000313|EMBL:EYR81888.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 426.0
  • Bit_score: 567
  • Evalue 1.20e-158
phage tail tape measure protein, family similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 424.0
  • Bit_score: 520
  • Evalue 4.90e-145
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
ATGGCCACTCTCGAAAGCCGCCTCAAAATCTCGCTGCTGGACGAGGTCACGTCTCCGATCCGTCATATCAGCGGCGCGATCGCCAGCTTCCAGCGTCAGCAGACGCAGTTCATGGCGCCATTCCGGGGCATGGTGGGTCAGGTCCTGGCGCTTGGCGCGGGCTATCTCGGTGTGACGCACGGTGTTGATTCCACCGTGGGCGCGGCGATGCGCTTCGAAAGCGCCTTCGCCGACGTCAAAAAGGTGGTCGATGGTACGGACCAGCAGCTGGACTTCATTCGCCAGACCATCAAGCAGATGTCCACCGAAATGCCGATTGCATCCGAGGACATGGCGGCGCTGTTTGCCTCGGCCGCCGAATCCGGCGTGGCCACAAACGATCTGAAGGAATTTGCCGAGATGGCGGCCCGGGTCGGGATCGCCTTCGACATGTCGGCCGGCGATGCCGGCGAAAGCCTTGCCAAGCTCAAGACGCAGCTCGGCCTGACGGTCGCGGAAACCGGCGACATGGCCGATGCCATCAATCATCTGTCGAACAGCATGGCGTCGAAGGCGAAGGACGTCACCGACTTCATGTTGCGCGTCGGTTCTCTCGCGGAGATGGGCGGCCTGACGAAAGAGCAGGTCGCGGCCATGGGCAGCGCAATGATCGCGGCCGGCGCGCAAGCCGAAACGGCGGGTACGGCGATGCAGAATGTCATCAAGGCTATGACGAAGGGCGATTCTGCCAAGAAAAGTCAGCGCGAAGTCGCCGCTACACTTGGCCTCGATCTGCCGACGTTGGCCAAGCAGATGCAAAAGGATGCGCCCGGAGCTATCAAGAGTGTCCTGAAGGCGATTGCCAAAATGCCAAAGGACCGGCATATCGCGCTGATCTCCGATTTCTTCGGTGACGAGGCCAAGGCCTTTGCGCCGTTGATCGGCAATCTCGGTCTGCTCGACCAGGCGCTCGACAGTGTTAGCGACAAGGCCAAGTTCGGGGGTAGCGCCTTCCGCGAATATACGGCGCGCGCCAACACCACGGCGAACGTTCTGCAGCTCTTGCGCAACCGCTTCAACAACATCTTCGAGACGTTCGGTGAAAGCTTCCTGCCGACGATCCGAAATGCGGCGCTTGGGGTCAACGATATCCTGGATACGCTTGGCGAGCGGGCAACCATCTTCGACAAGATGAGCAAAGCCTTCCAGGGCTTCATGCAGGGTTTTGCACCGGATAGCGATATCCGATCCTTTATCAATGATCTTGGCGATCTGCTGCTCGGCGCCGCTGACGGCTCGAAATCG
PROTEIN sequence
Length: 428
MATLESRLKISLLDEVTSPIRHISGAIASFQRQQTQFMAPFRGMVGQVLALGAGYLGVTHGVDSTVGAAMRFESAFADVKKVVDGTDQQLDFIRQTIKQMSTEMPIASEDMAALFASAAESGVATNDLKEFAEMAARVGIAFDMSAGDAGESLAKLKTQLGLTVAETGDMADAINHLSNSMASKAKDVTDFMLRVGSLAEMGGLTKEQVAAMGSAMIAAGAQAETAGTAMQNVIKAMTKGDSAKKSQREVAATLGLDLPTLAKQMQKDAPGAIKSVLKAIAKMPKDRHIALISDFFGDEAKAFAPLIGNLGLLDQALDSVSDKAKFGGSAFREYTARANTTANVLQLLRNRFNNIFETFGESFLPTIRNAALGVNDILDTLGERATIFDKMSKAFQGFMQGFAPDSDIRSFINDLGDLLLGAADGSKS