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SCNpilot_cont_500_bf_scaffold_32311_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1519..1854)

Top 3 Functional Annotations

Value Algorithm Source
Pilus assembly protein CpaE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2C1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 111.0
  • Bit_score: 185
  • Evalue 2.40e-44
Pilus assembly protein CpaE {ECO:0000313|EMBL:EYR80340.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 111.0
  • Bit_score: 185
  • Evalue 3.30e-44
ctpF; component of type IV pilus; K02282 pilus assembly protein CpaE similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 111.0
  • Bit_score: 177
  • Evalue 2.00e-42

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ACCAAGAACATGCTGGATGCGCTGCGCAAGCTTCGCCCCAACGACAAGGCACCGCATATCGTCCTCAATCAGGTCGGCGTGCCTAAGCGCCCGGAAATCTCGCCCGCCGATTTCTGCGAGCCGCTGGAAACCGATCCGGTCGCCATCATCACCTTCGATGCGCAGCTTTTCGGCAATGCCGCCAACAGCGGGCGGATGATCTCGGAACTCGACGCCAAATCGCCGACCGCGGAAACCTTTTCGCAGCTCGCCCACCTGATCACCGGCCGGGCGACGATGAAGAAGCCGAAGCGCGCCGGCATCGGCAAGGTGCTTGGCCTCCTGGCACGCAAGTAA
PROTEIN sequence
Length: 112
TKNMLDALRKLRPNDKAPHIVLNQVGVPKRPEISPADFCEPLETDPVAIITFDAQLFGNAANSGRMISELDAKSPTAETFSQLAHLITGRATMKKPKRAGIGKVLGLLARK*