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SCNpilot_cont_500_bf_scaffold_32417_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1431..1847)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein (Modular protein) n=1 Tax=Rhizobium sp. IRBG74 RepID=U4PU62_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 42.7
  • Coverage: 110.0
  • Bit_score: 87
  • Evalue 1.10e-14
Helix-turn-helix domain protein (Modular protein) {ECO:0000313|EMBL:CDN93687.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.5
  • Coverage: 99.0
  • Bit_score: 89
  • Evalue 4.10e-15
Helix-turn-helix domain protein (modular protein) similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 110.0
  • Bit_score: 87
  • Evalue 3.50e-15

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGACCAAGGAAGAAACGGCCGGTCTCATCGACCGGAATGCCGGCGCGCGCCTGCGTGCAGTCCGCGCCGATCGCGGCATCAGCCAGTCTGCGCTCGGCGATGCCATCGGCGTCACCTTCCAGCAAATCCAGAAATACGAGAAGGGCACGAACCGCATCTCGATTTCCCGGCTGGTGATCATCTGCCAGGCACTGAACTGCCACCCGATGGACATCATTGGCGAAGGCGTCGACGCGCCCACGTCCGCCGCACCGCTGGTCGATCTCGCCGCCGAAAACGCCAAGCTGCGGCGCGCCGTGCAGGCGGTCCGCAAGATCGTTGGCGGGTACGCCGAGCGAATGGGCATCGACGACATTGACGATGTGTCCGCCCCGGCTGGGCCCCAAGGCATAACCCATGCCCCGCAAACCCATTGA
PROTEIN sequence
Length: 139
MTKEETAGLIDRNAGARLRAVRADRGISQSALGDAIGVTFQQIQKYEKGTNRISISRLVIICQALNCHPMDIIGEGVDAPTSAAPLVDLAAENAKLRRAVQAVRKIVGGYAERMGIDDIDDVSAPAGPQGITHAPQTH*