ggKbase home page

SCNpilot_cont_500_bf_scaffold_42563_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 405..968

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein Rleg10DRAFT_2735 n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0C5L8_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 175.0
  • Bit_score: 271
  • Evalue 5.50e-70
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; Flags: Precursor;; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 175.0
  • Bit_score: 271
  • Evalue 7.80e-70
DNA helicase; K10979 DNA end-binding protein Ku similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 175.0
  • Bit_score: 269
  • Evalue 6.60e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGGCGCGCCCGGCTTTCTGGAGAGGCTATCTGAAACTCTCGCTGGTGACGGCGGCAGTGACGCTGACGCCGGCGACGACGGAAAGCCGGAAAGTCCGCTTCCACATCCTCAATCGCGCCACCGGCAACCGGGTGACCAGCCGTTATGTCGACAGCATCACCCACCGGGCGGTGGCGGACCGGAACCAGGTGCGCGGCTATCCCAAGGGCGAAGACGATTACGTGCTGATCGAGGACGAGGAAATCGACGCGCTCGGCGTGGAAAGCACCCGCACCATCGATATCGACCGTTTCGTGCCCACCGACGCCATCGACTGGCTGTGGTACGAGCGGCCGCACTTCATGATGCCGGCCGACAAGGTCGGCATGGAGGCCTTCGCCGTCATCCGCGCCGCCATGGAGGCGAAGAAGGTCGCAGGCCTGTCGCGGCTGGTTCTCTACGGCCGCGAGCATCCGGTTGCGCTGGAACCCTGCGGCAAGGGCATCGTCGTCTGGACCCTGCATTATGCCGATGAGCTGCGCGAGGCGGAGCACGTCTTCGATGTACCGAAGAAACCGAAATAA
PROTEIN sequence
Length: 188
MARPAFWRGYLKLSLVTAAVTLTPATTESRKVRFHILNRATGNRVTSRYVDSITHRAVADRNQVRGYPKGEDDYVLIEDEEIDALGVESTRTIDIDRFVPTDAIDWLWYERPHFMMPADKVGMEAFAVIRAAMEAKKVAGLSRLVLYGREHPVALEPCGKGIVVWTLHYADELREAEHVFDVPKKPK*