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SCNpilot_cont_500_bf_scaffold_43310_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 1..1083

Top 3 Functional Annotations

Value Algorithm Source
Putative recombinase n=1 Tax=Pseudomonas mendocina DLHK RepID=J7U8M8_PSEME similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 357.0
  • Bit_score: 423
  • Evalue 1.70e-115
Recombinase {ECO:0000313|EMBL:CDN92165.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 360.0
  • Bit_score: 722
  • Evalue 4.20e-205
site-specific recombinase similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 357.0
  • Bit_score: 418
  • Evalue 2.90e-114

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ACGACCCTTATCAAAAAAGGTTTCCGGCAAGGGGGACCGGCAGGATTTGGTTTGCGCCGGCTTCTCGTGGATGACTCCGGCAATGCGAAGTTCCAGCTTCGTCGCCTCGAACACAAGAGTATCCAGACGGACCGAGTGGTTCTCGTACCAGGACCACCTGAAGAGATCACCGTTGTCAGGCGCATCTATGCGGACTTCATCGAACGCGGCTTGACCGAACAGCAGATCGCAAACCGCCTGAACTGGGAAGGAATTCACACCGACCTCGAACGCCCCTGGACGCGCAGTACCGTTCGCCAGGTTCTCACCAACGAAAAATACATTGGCAACAACGTCTGGAACCGGCGATCTTTCAAGCTCAAGACCAAGCGCGTGCAAAACGATCCTGCACTTTGGGTCAGGGCCGATGGCGTGTTCGAATCAATCATTGATCCGAAGCTTTTCAATGCGGCGCAGAAAATTATCGCTACCAGGTCGCACCGGCCCGACAACGAGGAGATGTTGAACGCGCTGCAACGCGTACTGCAGCGCCACGGCTACCTCTCCGGGCTGATCATCGATGAGGCGGATAGTTGTCCCTCCGCCGGCGCCTATCAAAGCCGTTTCGGCAGCCTGCTACGGACGTATAAACTCATCGGATATCAGCCGGATCGCGACTATCGCTATGTCGATATCAATCGCCGTCTCCGCCAACAGTATCCCGACATAATAACGAGCGTCATCTCGCGAGTGCACGAAACAGGCGCGAGGGTCAGAAATGATGGCGCCAGCTCCATGTTCATCGTGAACGAGGAAATCCGCGCGTCGCTGGTCTTGAGCCGCTGCCACATTAGCACAGCCGGCCGAAAGCGGTGGTTCATTCGCTTCGATACCAGCCTCTGTGCGGACATTACCATCGCCGCAAGAATGGAACCGGAGGAAGCCTGTATCAAGGATTTCTACATCCTGCCTGCGCTCGACTGTTCCGGCGAGAAGCTACGCCTCTTCGAAAACAACGCCAGCGAACTTGACGTTTACCGGTTCGACACCCTCGACGCCCTGTACCACCTCGTCAAGCGCACCAGGATCAAGGATATCATCTGA
PROTEIN sequence
Length: 361
TTLIKKGFRQGGPAGFGLRRLLVDDSGNAKFQLRRLEHKSIQTDRVVLVPGPPEEITVVRRIYADFIERGLTEQQIANRLNWEGIHTDLERPWTRSTVRQVLTNEKYIGNNVWNRRSFKLKTKRVQNDPALWVRADGVFESIIDPKLFNAAQKIIATRSHRPDNEEMLNALQRVLQRHGYLSGLIIDEADSCPSAGAYQSRFGSLLRTYKLIGYQPDRDYRYVDINRRLRQQYPDIITSVISRVHETGARVRNDGASSMFIVNEEIRASLVLSRCHISTAGRKRWFIRFDTSLCADITIAARMEPEEACIKDFYILPALDCSGEKLRLFENNASELDVYRFDTLDALYHLVKRTRIKDII*