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SCNpilot_cont_500_bf_scaffold_48676_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1..351)

Top 3 Functional Annotations

Value Algorithm Source
RepC n=1 Tax=Rhizobium sp. LPU83 RepID=V5RE08_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 117.0
  • Bit_score: 197
  • Evalue 8.30e-48
Replication initiation protein RepC {ECO:0000313|EMBL:KEA03039.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 117.0
  • Bit_score: 201
  • Evalue 8.00e-49
repC; replication initiation protein RepC similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 117.0
  • Bit_score: 196
  • Evalue 4.40e-48

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGGAAACGGGATATATAACGACGCCCTTTGGGCGGCGGCCGATGACCCTTGCCTTGGTGAAGAGGCAGGTCGAGACGGAACAGGCCGAGTTGGCGAGGTCAATCGACAAGTGGAGAGTGTTTCGCGACGTCGGTGACGCCCGCTCGCGCCTTGGCCTTCAGGACCGTGCGCTTGCGGTATTGAACGCCCTCCTTTCCTTCCATCCGGGAGCCGAGCTTTGCCACGATAAGAATCTTGTCGTGTTTCCGTCGAATGCCCAGTTGTCTGCCCGTTCCAACGGCATCGCGGGAACGACGCTTCGTAAGTGTTTGGGAGCGCTCGTAGACGCCGGGATCATCATCAGAAAGGAT
PROTEIN sequence
Length: 117
METGYITTPFGRRPMTLALVKRQVETEQAELARSIDKWRVFRDVGDARSRLGLQDRALAVLNALLSFHPGAELCHDKNLVVFPSNAQLSARSNGIAGTTLRKCLGALVDAGIIIRKD