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SCNpilot_cont_500_bf_scaffold_9465_5

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 22 / 55 BSCG 28 / 51 ASCG 6 / 38 MC: 1
Location: 3299..4051

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S838_INTC7 similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 154.0
  • Bit_score: 108
  • Evalue 8.30e-21
XRE family transcriptional regulator {ECO:0000313|EMBL:EWT03511.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.1
  • Coverage: 181.0
  • Bit_score: 121
  • Evalue 1.30e-24
helix-turn-helix domain-containing protein; K15773 HTH-type transcriptional regulator, antitoxin HipB similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 154.0
  • Bit_score: 108
  • Evalue 2.60e-21

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Taxonomy

Intrasporangium oryzae → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 753
GTGACGACGGCCGGGCGGCGTTCAGGCTCCGATGTCGGTGGGGTGCTGGATCATCTCTGCATGGAGCACACCGAAAACCCAACGCGGACCGCCGACACGACGCTGGCCGCCGACACGACGCGGACGGACGCCGCGCGGACCGACGCCGCGCGGACCGACGCCGCGCGGACCGACGACGCGGCTGAGTCCGCAGGGCTCGATGTGTCCGGGTATGTGCGGCGCGTGCGAAGGCTGGCCGATCTGAGTCAACGGGACCTTGCCGAGCGTGTGGGCACCCCGCAGGCCGTCATCAGCCGAATCGAGAGCGGCGGTGACGTCAGCGTTCGTTCCTTCGAGCGGCTGCTTGCAGTTGCTGGCCTGCGGCTCGTGGTCGTCGACGCGAACGCGGGCACGGCTGAGCCGATGCCCCGTGACGTGTTCCGTGACCTCGGCGGTCGCCGTCGACCGGCACATCTGGACGTTCATGCCGAACCAGAGCGGCCGACGATGCAGATGCTCCTGCACGACTGTGATCCGGTCGCCCCCGGGGCCGCGTGGCATCACAAGCGCAGCGAACGTGACCGACTTCGTCGCCAGGCGGGGATCGACTCGCGAGCCGAACAGCTGAGCGTGAGCCTTGCGCGGCAGCAACCTGCCCTGCGACGCCCCGGCAGCAGCGATCGAAGGTCGGGCAGCGGCGAGCGATCGGCCGGAAGGACGACGCGCGCGGCGCCGACGAGCACGCGTGAACAGGCTGGTAGCGTGCAGGCGTGA
PROTEIN sequence
Length: 251
VTTAGRRSGSDVGGVLDHLCMEHTENPTRTADTTLAADTTRTDAARTDAARTDAARTDDAAESAGLDVSGYVRRVRRLADLSQRDLAERVGTPQAVISRIESGGDVSVRSFERLLAVAGLRLVVVDANAGTAEPMPRDVFRDLGGRRRPAHLDVHAEPERPTMQMLLHDCDPVAPGAAWHHKRSERDRLRRQAGIDSRAEQLSVSLARQQPALRRPGSSDRRSGSGERSAGRTTRAAPTSTREQAGSVQA*