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SCNpilot_cont_500_bf_scaffold_12305_1

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 22 / 55 BSCG 28 / 51 ASCG 6 / 38 MC: 1
Location: 2..586

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, integral membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9G2_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 213.0
  • Bit_score: 314
  • Evalue 7.70e-83
Glycine/betaine ABC transporter permease {ECO:0000313|EMBL:EXJ51453.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 215.0
  • Bit_score: 317
  • Evalue 1.30e-83
binding-protein-dependent transport systems inner membrane component; K02001 glycine betaine/proline transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 179.0
  • Bit_score: 263
  • Evalue 4.90e-68

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 585
GTCGCGATCGTGATCGCGATCCCCGTCGGCATCTGGGCGGCGCGCAGCGCGCGCGTCTCGCGCGTCGTGCGCCCGATCCTCGACTTCCTGCAGACGATGCCCGCGTTCGTCTACCTCATCCCCGCGATCATCTTCTTCGGTGTCGGCGCCGTGCCCGGCATGATCGCGACGATCATGTTCGCCGTCGCTCCCGGCGTGCGGCTGACCGAGCTCGGCATCCGCGGCGTCGACTCTGAGGTCGTCGAAGCAGGGCAGGCGTTCGGCGCGACGCCCGCACGCGTGCTGCGCCAGATCCAGATCCCGCTGGCGCTGCCGTCGATCATGGCGGGTGTCAACCAGGTGATCATGCTGAGCCTGTCGATGGTCGTCATCGCCGGCATGGTCGGCGCCGGCGGACTCGGCGGCGAGATCGTCCGCGCCATCGGACGCATCAACGTCGGCCTCGGCTTCGAGGCGGGTATCTCGGTCGTCATCATCGCGATGATCCTCGACCGCCTCACGGCATCCCTCGGCACGCGCCGCCCCGCGCGCCGTGCCACCACAGACCAATCCGCACACAGCACACAGATGGAGAGGACCCCATGA
PROTEIN sequence
Length: 195
VAIVIAIPVGIWAARSARVSRVVRPILDFLQTMPAFVYLIPAIIFFGVGAVPGMIATIMFAVAPGVRLTELGIRGVDSEVVEAGQAFGATPARVLRQIQIPLALPSIMAGVNQVIMLSLSMVVIAGMVGAGGLGGEIVRAIGRINVGLGFEAGISVVIIAMILDRLTASLGTRRPARRATTDQSAHSTQMERTP*