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SCNpilot_cont_500_bf_scaffold_33262_3

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 22 / 55 BSCG 28 / 51 ASCG 6 / 38 MC: 1
Location: comp(1831..2400)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 188.0
  • Bit_score: 360
  • Evalue 1.70e-96
def; N-formylmethionyl-tRNA deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 188.0
  • Bit_score: 327
  • Evalue 2.70e-87
Peptide deformylase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YK36_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 188.0
  • Bit_score: 347
  • Evalue 8.00e-93
  • rbh

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 570
GACGTGGCTGTTCTTCCGATTCGCATCATGGGCGATCCCGTCCTGCACGCCCCCGCCGAGCCCGTCGGCGAGATCACCGACGAGATTCGACAGCTCGTCGCCGACATGTTCGAGACGATGGATGCCGCGCCGGGCGTCGGCCTCGCGGCGCCGCAGGTCGGCGTCGGTCTGCGCATCTACACGTACACCTACCAGGACGACGAGGGCGAGCCGTGGCGCGGCGTGCTCATCAACCCCGAGCTGTGGATGACGCCGACGATCCCGGGAGCGCCCGACCCTGACGACGAGTCGGAGGGATGCCTGTCGTTCCCCGGCGAGCGTTTCCCGCTGCGCCGCTCCGAGCGCGTCCAGGTGACGGGCATCGACCTTGAGGGCGCGCCGGTGCGCATCGAGGTCGACGGCTGGCGTGCGCGCATCATGCAGCACGAGTTCGATCACCTCGACGGCATCCTGTACATCGACCGCCTCGACGACGGCGACTGGAAGACCGTGCAGAAGATCGCCCGCAAGCGCGGTTGGGGCCGCCCCGGCGCCGCGTGGATGCCCGGCGTCGACGACATCGACGCCTGA
PROTEIN sequence
Length: 190
DVAVLPIRIMGDPVLHAPAEPVGEITDEIRQLVADMFETMDAAPGVGLAAPQVGVGLRIYTYTYQDDEGEPWRGVLINPELWMTPTIPGAPDPDDESEGCLSFPGERFPLRRSERVQVTGIDLEGAPVRIEVDGWRARIMQHEFDHLDGILYIDRLDDGDWKTVQKIARKRGWGRPGAAWMPGVDDIDA*