ggKbase home page

SCNpilot_cont_500_bf_scaffold_28472_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 13 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(512..1123)

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein, MarC family n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 197.0
  • Bit_score: 349
  • Evalue 3.00e-93
  • rbh
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 197.0
  • Bit_score: 349
  • Evalue 4.20e-93
multiple antibiotic transporter similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 200.0
  • Bit_score: 347
  • Evalue 2.70e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGGAAGCGCAAATGACCACGTTGTCGGCGGGCATCATGTTGTTCCTGATCATGGACCCGCTGGGCAACATTCCGATCTTCCTCAGCCTGCTCAAGGACGTGCCGCCGCGGCGCCGGCGCCGGGTGATGGTGCGCGAGCTGCTGATCGCGCTCGGCGTGCTGCTGGTGTTCCTGTTCGGCGGCCAGCAGTTCCTGCACCTGATGCAGCTCAAGCCCGACTCCATCAGCGTCGCCGGCGGCATCGTGCTGTTCCTGATCGGCATCCGCATGGTGTTCCCGCCGGCCGACGGCAGCGGCATCTTCGGCAAGCCGGGGCAGGGCGAGCCCTTCATCGTGCCCATGGCGATCCCCGGCGTGGCCGGGCCCTCGGCGATGGCCGCGCTGCTGCTGCTCACCAACACCCAGCCCGGGCGCACCGCGGATTGGGTGCTCGCGCTGCTGCTGGCGTGGTTGGCCACCGCGATCATCCTGCTCAGCTCGACCTACCTGTTCCGCTGGCTGGGCGAGAGCGTGCTGACCGCGCTGGAGCGCGTGATGGGCATGCTGCTGATCGCCTTGTCGGTACAGATGTTCATGTCCGGCGTGGCCTCGTTCCTGCGTTCGATGCCCTGA
PROTEIN sequence
Length: 204
MEAQMTTLSAGIMLFLIMDPLGNIPIFLSLLKDVPPRRRRRVMVRELLIALGVLLVFLFGGQQFLHLMQLKPDSISVAGGIVLFLIGIRMVFPPADGSGIFGKPGQGEPFIVPMAIPGVAGPSAMAALLLLTNTQPGRTADWVLALLLAWLATAIILLSSTYLFRWLGESVLTALERVMGMLLIALSVQMFMSGVASFLRSMP*