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SCNpilot_cont_500_bf_scaffold_53614_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 13 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 1..801

Top 3 Functional Annotations

Value Algorithm Source
RNAse R (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 271.0
  • Bit_score: 473
  • Evalue 5.60e-131
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 271.0
  • Bit_score: 473
  • Evalue 2.50e-130
Ribonuclease R n=1 Tax=Rhodanobacter denitrificans RepID=I4WY22_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 271.0
  • Bit_score: 473
  • Evalue 1.80e-130

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ACCGGCGGCAAGCCGGCGGACTACACCTATACCTCCGCCGAGATGGCGGCGATGGCCGTGCACTGCTCGCAGCGCGAGCGCCGTGCCGAGGAGGCCGAGCGCGACGTGGACGAGCGCTTCAAGTGCGCGTGGATGGCCAAGCACGTGGGCGAGGAGTTCGACGGCGTGGTCACCGGCGTCACCTCGTTCGGCCTGTTCGTGGAACTGGACGAATCGAAAGTCTCCGGCCTGGTACACATCAGCCAGCTGGTGAACGACTACTACCACTTCGACGCGGTGCGCAAGCTGCTCAAGGGTGAGCGCACCGGCGCGCAGTTCCGCCTCGGCGACCACGTGCGCATCCAGGTGCTGCGCGCGAGCCTGGAGGATCGCAAGATCGACTTCCGCCTGGTCTCGCCGCGCACGTCGGCCCCGGCTCCGGCCCCGACCGGCAGCGGCAAGGCGTATGACTATGCCGCCGCGGGCGAGCGCTATTCGCTGCCGAAGAAGGCGGCCGCCACGACCAAGGCACCGGGCATGTTCGGTCGCGCCGCCAAGGCGATCGGCCGCGCATTCGGCCGCAAGGAGGCCGAGGTTGCCACACCGGCGCCGGCCCCGCGCAAGGCGGCGGCGAGCGATAATCCGCCGCCGCGTGCACAGTCGCCGGCAGGGCGCCAGCATCAGGGCCGCAGGGTCGAACCGTCGTCCGATCGTCGCCCGCGCAAGGACGGTTCCGCCAGGCGCGCGCCGGCCCCGGCTGCCGTCCCGCCGGCGCCGAAGAAGCACGGCGGCCGCAAACCGAAACCGAAAGGCAAGCCATGA
PROTEIN sequence
Length: 267
TGGKPADYTYTSAEMAAMAVHCSQRERRAEEAERDVDERFKCAWMAKHVGEEFDGVVTGVTSFGLFVELDESKVSGLVHISQLVNDYYHFDAVRKLLKGERTGAQFRLGDHVRIQVLRASLEDRKIDFRLVSPRTSAPAPAPTGSGKAYDYAAAGERYSLPKKAAATTKAPGMFGRAAKAIGRAFGRKEAEVATPAPAPRKAAASDNPPPRAQSPAGRQHQGRRVEPSSDRRPRKDGSARRAPAPAAVPPAPKKHGGRKPKPKGKP*