ggKbase home page

SCNpilot_cont_500_bf_scaffold_4993_6

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(7098..9350)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036597E7 similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 753.0
  • Bit_score: 1032
  • Evalue 0.0
membrane-bound dehydrogenase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 747.0
  • Bit_score: 796
  • Evalue 8.10e-228
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:AEI50567.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 747.0
  • Bit_score: 796
  • Evalue 3.60e-227

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2253
ATGCAGGTTAAGGTTTTTTTTATATTATTTTTTTCAATGAGTGTATTACTTATTAGTTGTCATACTAATTCTAATAAAAATCCTTTTATATCTTTTGATACCTATAAAGTGGCGGATGGGTTTGAGTTACAGTTGGCTGCGGCAGAACCCTTGATAGAAGCTCCGGTGGCTATGGATTTTGATGGAGAGGGTAGAATGTGGGCGGTTGAGATGCGTGGCTTCATGCCAAACCTATCAGGGATAGGAGATACGATACCTAATGGAAGGATCAGTATTTTAGAAGATTGGGATGATGATGGCGTGGCCGACCATTCTAAAGTGTTTGTAGATAGCCTGGTACTGCCGAGAGCTATGTCACTCGTTTATGGTGGCCTTTTATATGCTGCTCCGCCCGATCTTTGGTTTGTAGAAATCAACAATGACAAACCTGGCAAAAGAATTCTGGTAGATTCGCTGTACGCTGTAGGCGGTAGTCCTGAAGCTCAGCCTAATGGGCTTATGATGGGGATAGACAATTGGATTTACAGCGCAAATTCTAACTTCAGGTACCAGCTGAGAGATGGCAAGTGGATCAAAGAGCCTACTTCATTTCGTGGTCAGTTTGGAATCAGCCAGGATAATTACGGAAGGCTTTACTATAATTATAATTCAGTACAGATAGCAGGAGATTATGTATTGCCCAATACCATCATTAACAATCCTTATCTAAAGCCCAAAGAAGCAATAAATAAAGTGCTTAGTAATGACCAAAGCGTTTATCCTTTACATCCTACTACTGTGAACAGAGGTTATGAAAAAGGGATATTGAATAAAGATAGCCTGCTGGTAGCTGTTACCGCATCTTGCGGCCCCGTAATTTACCGTGGCGATCAGTTCCCTGATGATTACCACCAAAACTATTTTGTGTGTGAACCACAGGCAAATCTTGTGAAGCGGGATATCCTTACATTTGGAGCTATCCAGACAACGGCAAAACCGGCGTGGAATGATAAAGAATTTATTGCATCCACGGATGAAGGTTTTCGTCCTGTAAATCTAAACAATGGCCCTGATGGCGCTATGTATGTGGTAGATATGCATCGTGGCATTATGGAGTACGGCGCATTTTCAACGCCTTATTACAATAATGGATTAACTGTTAAAAAGCTTGATACACTCTTACACAAAGGGCGTATATTAAGGGTAAAGTACAAGGACAAAAAGCTTGATAAGGTTCCGGATCTTAATAAAGCCTCTGAAGAAGCATTGGTTGTATTATTAAAAAGTAAGAATGGATGGGTGAGAGACAGGGCTCAGCAATTATTGATCTTTAAACAACAAAAATCAGTAGTTCCTGAATTGGAGAAACTGGCGCAGGACAATAGTAATCCCATAACTGCCATACATGCCTTGCATACACTGGACGGGCTTAATGCATTGTCTTTTGAGTTCACAAAAAAAATAGCAGCTTCACAAAATCCAATGTTGTCGGCGCACGCCCTGCTTCTTCTGCAAAAGAATAATACCAAAGACAATGTGAAGCCGATGGCAGCATTGGCAAATGATTTATTAAACAGGAAAGATAGTATTATTGACCTGTACCTGGCACTTTCATTAGGTCCATGGGCAGAAGTTTCCAATGAAGCTTTTTTTCCGGTACTTCTTAAATTATCTCAAACTTATCCGGGTACGGCTATTTACCATGAAGCGATAATTAACAGCCTGAGAGGATTAGAAGAGAAATTCCAGGTAATGGCTCAATCAAACAATCAGAAAAATGCTTATAAGCCATTGGATAGTTTATTAGCTGTAACTATTAAGAATAAGCAGGAAGGAAAAATGAATTCAATTTTTGTTACGTATACCGCTCCGGTTGATTCAAGAACAAACGGGCTTGCTATTTTTCGCAGTACTTGTGCAACCTGTCATGGAGTAGATGGGGAAGGTATAGAGAACCTTGCGCCGCCGTTGACAGGTTCCGAATATGTAGCAGGATCTCCGGAAAGATTAGCTATGATTATTTTAAATGGTCTGGAAGGCCCTGTGCATGTGAAAGGACAGCTATACAACTTTAATGGTAGCATGCCCAATTTTGGAAATAATTTTGGTGATAAAGACATATCCGATATCATTGAATATCTACAAAATTGTTTTGTATCCACTCCGGTAAAAAGTATCAGCGCTAAAGAAATAAACGGACTTAGAAATAAAAAGCAGGGAACGCTAACCGAAAAGGATTTATTGGATATGCCTGACAAGATAAAGGACAAATGA
PROTEIN sequence
Length: 751
MQVKVFFILFFSMSVLLISCHTNSNKNPFISFDTYKVADGFELQLAAAEPLIEAPVAMDFDGEGRMWAVEMRGFMPNLSGIGDTIPNGRISILEDWDDDGVADHSKVFVDSLVLPRAMSLVYGGLLYAAPPDLWFVEINNDKPGKRILVDSLYAVGGSPEAQPNGLMMGIDNWIYSANSNFRYQLRDGKWIKEPTSFRGQFGISQDNYGRLYYNYNSVQIAGDYVLPNTIINNPYLKPKEAINKVLSNDQSVYPLHPTTVNRGYEKGILNKDSLLVAVTASCGPVIYRGDQFPDDYHQNYFVCEPQANLVKRDILTFGAIQTTAKPAWNDKEFIASTDEGFRPVNLNNGPDGAMYVVDMHRGIMEYGAFSTPYYNNGLTVKKLDTLLHKGRILRVKYKDKKLDKVPDLNKASEEALVVLLKSKNGWVRDRAQQLLIFKQQKSVVPELEKLAQDNSNPITAIHALHTLDGLNALSFEFTKKIAASQNPMLSAHALLLLQKNNTKDNVKPMAALANDLLNRKDSIIDLYLALSLGPWAEVSNEAFFPVLLKLSQTYPGTAIYHEAIINSLRGLEEKFQVMAQSNNQKNAYKPLDSLLAVTIKNKQEGKMNSIFVTYTAPVDSRTNGLAIFRSTCATCHGVDGEGIENLAPPLTGSEYVAGSPERLAMIILNGLEGPVHVKGQLYNFNGSMPNFGNNFGDKDISDIIEYLQNCFVSTPVKSISAKEINGLRNKKQGTLTEKDLLDMPDKIKDK*