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SCNpilot_cont_500_bf_scaffold_8084_4

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 2501..3103

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XS62_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 203.0
  • Bit_score: 182
  • Evalue 4.70e-43
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:GAO43327.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 203.0
  • Bit_score: 221
  • Evalue 1.30e-54
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 203.0
  • Bit_score: 182
  • Evalue 1.50e-43

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 603
ATGGCAATAAAGGACAGTCATACAGAACAACAAATCAAAGAAGCGGCCAAACGTCTTTTTTTCAAAGAAGGGAGGTTTAAAGCCACCACACAGGAAATTGCAGATGCCGCGGGAGTGAACAGGACCCTGGTGAATTATTATTTCCGCTCGAGAGATGTATTGTTTGACGAGGTATTGAAAGATGCAAGGGAAGCAATGACCAACCGCCTGAAAACTTCTGTAGGGCAGGAAGATATCCCATTCCGGGTACGCATAGAAAGCTTTATTGATGTAGTGATGGAACACTCTTTAACTTACCCTTACATGGACATCTATATAGTATCGCGGATGAATGATGATTTTAACCATGAGAGTGATATTATAGCAAATATTAAGAAGAATGAAGATCTGAAAATGTTTTTAAAAATGATAGAAGGGGAAATGAACAAGGGAAACATAGAAAAAATGGAACCTGTACAATTTTTACTGAGCCTTATGTCATTGCTTATTTACCCCGTGATCATCCAGCCGTTATTTAAAAAAGTATTGCAGGTAACCGATCGCCAGTACCAGCATTTGCTTAAAGAACGCAAAGAAATTATTTTAAAAACACTTTTAAAATAG
PROTEIN sequence
Length: 201
MAIKDSHTEQQIKEAAKRLFFKEGRFKATTQEIADAAGVNRTLVNYYFRSRDVLFDEVLKDAREAMTNRLKTSVGQEDIPFRVRIESFIDVVMEHSLTYPYMDIYIVSRMNDDFNHESDIIANIKKNEDLKMFLKMIEGEMNKGNIEKMEPVQFLLSLMSLLIYPVIIQPLFKKVLQVTDRQYQHLLKERKEIILKTLLK*