ggKbase home page

SCNpilot_cont_500_bf_scaffold_8701_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(3..728)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor plug n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYK5_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 235.0
  • Bit_score: 201
  • Evalue 9.10e-49
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 235.0
  • Bit_score: 201
  • Evalue 2.90e-49
TonB-dependent receptor plug {ECO:0000313|EMBL:ACU04487.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 235.0
  • Bit_score: 201
  • Evalue 1.30e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 726
ATGAAACTAACCATAGTTTTAATAATCGCCGCCTTCATTCAGGTTTCTGCAAAGGGATATTCTCAAAAAATAACCCTTCAGGAGAATAATATTTCGCTGCAGCAATTATTCGAAAAGATAAGAACGCAGACAGGATACAAATTCTTTTATGCCGATGAAGTGCTTGCCAATGCCCGTAAGGTAAACATGAATGTGACGAATGGCAACATAGAGCAGGTGCTGGATGCTGCTTTTAAAGACCAGCAACTGACATACGCTATTTCGGAACGAACTGTTATTATAAGGAGACAGCAGGAAACTCCGGGCGAAGCAGCGGCAATACCTCCTCCGGTAGAGATCCGCGGAAGAGTGGTGAACGCACAGGGCGAGCCTTTACAAAATGTATCGGTAGTGATCGCAGGAACTAAAACGGGCACTTATACTAATGCCGACGGTTATTTTACGATTACAGCTCCCGGCAACAATAACATCGTGCTGGAAGTGTCCAGCGTGGGATACCAGAGCAAAAAAGTAGCTGTAGGAAAACAGACAAATATTAATGTGGTATTGGAGATAGAAGCCTCCAGCCTGAGCAATGTAGTGGTGGTAGGATATGGATCTGTCAAAAAAGTTGATTTAACAGGATCCGTAGGTACGGTGAATGTAACCGATATGCAAAAAGCGCCGGTGAGCTCCTTTGCCCAGGCGCTGGCAGGAAGGGTTGCAGGGGTACAGGTCAACAGCGTT
PROTEIN sequence
Length: 242
MKLTIVLIIAAFIQVSAKGYSQKITLQENNISLQQLFEKIRTQTGYKFFYADEVLANARKVNMNVTNGNIEQVLDAAFKDQQLTYAISERTVIIRRQQETPGEAAAIPPPVEIRGRVVNAQGEPLQNVSVVIAGTKTGTYTNADGYFTITAPGNNNIVLEVSSVGYQSKKVAVGKQTNINVVLEIEASSLSNVVVVGYGSVKKVDLTGSVGTVNVTDMQKAPVSSFAQALAGRVAGVQVNSV