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SCNpilot_cont_500_bf_scaffold_10690_3

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 3970..4179

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D096_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 65.0
  • Bit_score: 93
  • Evalue 1.00e-16
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 65.0
  • Bit_score: 93
  • Evalue 3.20e-17
ABC transporter {ECO:0000313|EMBL:ADY51843.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 64.0
  • Bit_score: 93
  • Evalue 1.40e-16

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Taxonomy

Pseudopedobacter saltans → Pseudopedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 210
ATGGTAACACATAATCCTAATATTGCAATTGTGTCCGATGCAGAGCAGATAATTTATATGGATATTGATAAAGAAAATCGCTATAAAGTTTCTTCAATAAGTGGAGCAATAGAAAATCCGATAATCAATAACCACATTGTCAATATACTGGAGGGCCGGATGAAAGCTTTCAATAATCGACGACTTAAATACAGAAAAAAGAATAAGTAA
PROTEIN sequence
Length: 70
MVTHNPNIAIVSDAEQIIYMDIDKENRYKVSSISGAIENPIINNHIVNILEGRMKAFNNRRLKYRKKNK*