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SCNpilot_cont_500_bf_scaffold_8980_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(3..434)

Top 3 Functional Annotations

Value Algorithm Source
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZC07_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 125.0
  • Bit_score: 92
  • Evalue 2.70e-16
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 119.0
  • Bit_score: 92
  • Evalue 1.10e-16
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD13872.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 125.0
  • Bit_score: 92
  • Evalue 3.80e-16

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Taxonomy

Parabacteroides merdae CAG:48 → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 432
ATGCTACTGTCTGCACTGTTGCTGGTGCATGCCACAGTATTGCGGGGACAGGATGATGCAATCCTGCCCTCCGCCCCGGATAATGCCGTTGCTGAAAACTCTGGTGCGGCCATTATAAAAACAGGCTCCCTTCCGGCAGCAACCCTTGAAGCAGCAGCTCAGGCAGATTTCCCTGTTAAAGGACATGTAAGCGATACCAGGGGTCCTCTGGCTGGCGTAACAGTGACTGAAAAAGGAAAGGCAAATGCAACAACAACCAATAATGATGGAAATTTTTCAATAAGGGTAGCCGATGGGAATGCTATATTGATATTTACTTCAGTAGGATACAATACGCAGGAAGTCGCTGTAAGCAACAGAACAAATATCAGTGTCCAGCTCCAAACAGCGAGCAGGGAAATGGACGCTGTAGTTGTGACTGCCCTGGGTATC
PROTEIN sequence
Length: 144
MLLSALLLVHATVLRGQDDAILPSAPDNAVAENSGAAIIKTGSLPAATLEAAAQADFPVKGHVSDTRGPLAGVTVTEKGKANATTTNNDGNFSIRVADGNAILIFTSVGYNTQEVAVSNRTNISVQLQTASREMDAVVVTALGI