ggKbase home page

SCNpilot_cont_500_bf_scaffold_12506_2

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 965..1675

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Niabella aurantiaca RepID=UPI00036F5AB9 similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 225.0
  • Bit_score: 355
  • Evalue 3.70e-95
two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 229.0
  • Bit_score: 352
  • Evalue 7.50e-95
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEW02849.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 229.0
  • Bit_score: 352
  • Evalue 3.30e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 711
ATGGAAAAATCTATTAACCAGGGATATATATTATTGGTAGAAGACGAAGAAAATCTTCAGGAAGCATTAAAGCTGAACCTGGAACTGGAAGGGTATGAAGTAACCAGTGCAGGCGATGGCGCCGAAGCGCTCAAAAGGATCAATGAAGAATATTTCGACCTGATCATTCTTGATGTGATGCTTCCCGAAATTGACGGCATCGGTGTAGCCGAAAATGTCAGGCTGAAGAATAATGATGTTCCTATTTTAATGGTAAGCGCCAAAAGCAGCACTGCCGACAGGGTGCTTGGCCTGAAAAAGGGAGCGGATGATTATATCACCAAGCCTTTCAACCTTGAAGAGCTGTTGCTGCGTGTGCAGAAGCTGATCAACAAAAATAAAAAGCTGCAGGAAAAAGAGACGGTAGAAGAGCGTTACCATTTCGGCAATAACATTATAGACTTCAAGGCCCAGTCTGCTGCCAATTTCAGAGGTGAAGTGATCGCATTGAGCAAAAAGGAAGGCATGCTTTTAAAGCTGCTTATCGAGAACAAAAATGATGTGGTGCCCCGCGAAAAGATATTACAGGCAGTATGGGGGTATAACGTATACCCCACCACCCGCACCGTAGACAATTTTATATTGAATTTCAGGAAATACTTTGAGCTGGATAGCCGTAATCCCAAATATTTTCATTCCATCAGAGGTGTAGGATATAAGTTTATGGTTTAA
PROTEIN sequence
Length: 237
MEKSINQGYILLVEDEENLQEALKLNLELEGYEVTSAGDGAEALKRINEEYFDLIILDVMLPEIDGIGVAENVRLKNNDVPILMVSAKSSTADRVLGLKKGADDYITKPFNLEELLLRVQKLINKNKKLQEKETVEERYHFGNNIIDFKAQSAANFRGEVIALSKKEGMLLKLLIENKNDVVPREKILQAVWGYNVYPTTRTVDNFILNFRKYFELDSRNPKYFHSIRGVGYKFMV*