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SCNpilot_cont_500_bf_scaffold_11333_5

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(3433..3744)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BXW8_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 86.0
  • Bit_score: 91
  • Evalue 4.40e-16
Helix-turn-helix domain protein {ECO:0000313|EMBL:EHQ02131.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 86.0
  • Bit_score: 91
  • Evalue 6.10e-16
lambda repressor-like DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 71.0
  • Bit_score: 89
  • Evalue 5.20e-16

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Taxonomy

Gillisia limnaea → Gillisia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 312
ATGTGGTATATTGATACCACATTTATTTTTCCCCATATTGAGACCTTGCTACAAATCGACATGATGGCTAAAGTTGTAGAAAGCGATTTTTTAGTCCAGTTTGGCAAGCAGCTTGAAAAGCTAAGAAAGAAGAAAGACCTAAGCTACAGAAAGCTTGCACAAAATTGCAATATAGATTATAGCAATATTAGCAAAATTGAAAAAGGAACCGAAAAAGCTAACATTACTATGTTAACGTTACTGGAACTGGCTAAAGGTCTGGAAGTACATCCCAAAAAGCTGCTGGATTTTGAGTTTGATTTTGAGGATTGA
PROTEIN sequence
Length: 104
MWYIDTTFIFPHIETLLQIDMMAKVVESDFLVQFGKQLEKLRKKKDLSYRKLAQNCNIDYSNISKIEKGTEKANITMLTLLELAKGLEVHPKKLLDFEFDFED*