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SCNpilot_cont_500_bf_scaffold_10152_4

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(1999..2502)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C3H1_SPHS2 similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 163.0
  • Bit_score: 136
  • Evalue 1.90e-29
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 163.0
  • Bit_score: 136
  • Evalue 6.00e-30
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADZ79359.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.6
  • Coverage: 163.0
  • Bit_score: 136
  • Evalue 2.70e-29

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Taxonomy

Sphingobacterium sp. 21 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 504
ATGGAGCACGAAAGTTTAGTTGAATTATATCGGGAAGTCTTTCCCGAGGCAGCGCGTTTAATAAAGCGTTTGGGCGGAGATCTGGAAGAAGCGAAAGATGCCTTTCATGATGCGCTATTGATATATCTTGAAAGAGAAGCAAAAGGCACATTGCAGATTCATACTTCGGCAAAAGCATATTTGCTGGGCACTGCTAAAATACTTTGGCTTCATGCTAAAAATCAATATTTTGATCCATTGTCGGAAGATGTTGAAGCATTTGTTGATGAAGCAAATGAAGCTGCAGACGAAGAAAAAAATATTTTTCACTACTTATTGTTGGCTGGACAAAAATGTTTACACATGCTCAAAGCATTTTATTACGATAATCTTTCGCTTCAACAAATCGCTGCAGTTTTTGGTTTCAATGGCGTTCGTTCGGCAACAGTACAAAAACATAAATGCATTGAAAAAATTCGCACAGCGCTAAAAAAAAGAAATGTATATGAGGAACGATTTAATTGA
PROTEIN sequence
Length: 168
MEHESLVELYREVFPEAARLIKRLGGDLEEAKDAFHDALLIYLEREAKGTLQIHTSAKAYLLGTAKILWLHAKNQYFDPLSEDVEAFVDEANEAADEEKNIFHYLLLAGQKCLHMLKAFYYDNLSLQQIAAVFGFNGVRSATVQKHKCIEKIRTALKKRNVYEERFN*