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SCNpilot_cont_500_bf_scaffold_12709_3

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 1659..2540

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 294.0
  • Bit_score: 387
  • Evalue 4.50e-105
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 294.0
  • Bit_score: 387
  • Evalue 2.00e-104
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCS6_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 294.0
  • Bit_score: 387
  • Evalue 1.40e-104

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 882
TTGCTCAGCGAAACGATTGACGCCCTGCAGGTAAAAGCAGGGGGAACTTATGTGGATTGCACTTTTGGCGGTGGCGGTCATAGCAAAGCCATACTCAATATGCTGGATGCTGATGGCAGGCTGCTGGTGTTTGACCAGGATGCTGACGCCAGACAGAATGTGCCTGACGACCCGCGCATTACTTTCCTCCAATACAACTTCCGTCATGTGCAGCGCATACTGCGACTGCACAGGATAGAGACGGTAGATGGCATATTAGCCGATCTTGGCGTGTCGAGCCACCAGTTTGATGAAGCCGGACGCGGGTTCTCCACCCGGTTCAATGATGCATTGCTTGATATGCGGATGGACCAGCGGCAGGAGCTCACCGCCGCCGGTATTATAGAAACCTATACCGAGCAGGCGCTGCACAAGCTGTTTGAGCAATATGGCGAAGTGACCAATGCAAAAACGCTGGCGAAAACCATCGTGCAATACCGTCAGCTTACCCCCGTCAAAACAGTAAATGAGCTCAGGGCGGCAGCAGCTTCCGTGGTGAAAGGTAATCCCAACAAATATTTTGCCCAGGTATTCCAGGCGCTGCGCATGGCGGTAAACGATGAAGCAGGCGCATTGCAGGAACTGCTCCGGCAACTTCCCTCCCTCCTGAAGAAAGGCGGCCGCGCTGCCATCATCACTTTTCACAGTATTGAAGACAGGCTGGTAAAAAACTTTTTCCGCAGCGGAGGGTTTGACGAAGTGGCGCCGGATGCTCTTTTTGGCACACGCCCTGAGAGCCCGTTCGTGCTGGTCACCAAAAAACCAATTATCCCTTCCGCTGCCGAAATACGGCAAAACCCCAGGAGCCGGAGCGCTAAGCTGCGGGTGGCGGAGAGAAGATGA
PROTEIN sequence
Length: 294
LLSETIDALQVKAGGTYVDCTFGGGGHSKAILNMLDADGRLLVFDQDADARQNVPDDPRITFLQYNFRHVQRILRLHRIETVDGILADLGVSSHQFDEAGRGFSTRFNDALLDMRMDQRQELTAAGIIETYTEQALHKLFEQYGEVTNAKTLAKTIVQYRQLTPVKTVNELRAAAASVVKGNPNKYFAQVFQALRMAVNDEAGALQELLRQLPSLLKKGGRAAIITFHSIEDRLVKNFFRSGGFDEVAPDALFGTRPESPFVLVTKKPIIPSAAEIRQNPRSRSAKLRVAERR*