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SCNpilot_cont_500_bf_scaffold_14760_3

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(1790..3154)

Top 3 Functional Annotations

Value Algorithm Source
trpB; tryptophan synthase beta chain; K06001 tryptophan synthase beta chain [EC:4.2.1.20] similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 454.0
  • Bit_score: 737
  • Evalue 2.70e-210
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 454.0
  • Bit_score: 737
  • Evalue 1.20e-209
tryptophan synthase subunit beta n=1 Tax=Rudanella lutea RepID=UPI0003712D11 similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 451.0
  • Bit_score: 755
  • Evalue 4.00e-215

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Taxonomy

Caldilinea aerophila → Caldilinea → Caldilineales → Caldilineae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1365
ATGTCAAAGCAAAGAAAGATCACGCTGCAGGAGTCGGAGATTCCTACCCATTGGTATAATATCCTGGCAGACATGCCTACCAAACCCCTGCCTCCACTGCATCCCGGGACAGGACAGCCGATAGGACCGGAAGACCTTGCGCCATTGTTCCCTATGGAACTGATAAAACAGGAAGTGAGCGCTGATAAATGGATCGAAATACCTGATGAAGTGAGAGATATTTACAGTATCTGGCGCCCTACACCAATGTACAGGGCTTACGGGCTGGAAAAAGCGCTTGGCACCAAAGCGAAGATCTATTATAAATATGAGGGAGTGAGTCCTGCCGGTTCTCACAAGCCTAATACTTCCGTGCCACAGGCATATTACAACATGAAAGAAGGCGTGAAGAAAATTTCTACCGAAACAGGCGCCGGTCAGTGGGGGAGTGCGCTGAGCTTTGCCTGTAAGCTGTTTGGTATTGAATGCGAGGTTTTTATGGTAAAAGTGAGTTATGAGGGCAAGCCTTACCGCAAGATCATGATGAATACCTGGGGCGCGACCGTGCATCCATCACCAAGCAACCTTACCAATGCGGGCAGAACCATACTTGCTAAGGATCCCGATTCGCCGGGCAGCCTCGGTATTGCCATATCCGAAGCGGTGGAAGTAGCTGCCATGAACAGCGATACCAAATATTCTCTGGGCAGTGTATTGAATCATGTACTGATGCACCAGACCGTTATTGGTCTTGAGGCATTGAAGCAGATGGAAAAAGCGGGAGATTATCCTGATATAGTGATTGCGCCATTCGGGGGCGGATCTAATTTTGCAGGTATTGCCTTTCCTTTCCTTGAAAATAACCTTACCGGCGGTAAAAAAGTAAGAGCTATTGCGGTAGAGCCCACGTCCTGCCCCAAGCTTACGCGTGGTATATTCCGTTATGATTTTGGAGATACCGTAGGCATGACCCCGCTGATACCGATGTATACGCTCGGGCATAATTTTATTCCTTCACCTATCCATGCCGGGGGACTGCGCTATCACGGTGCGGGCGCCATTGTGAGCCAGTTGCTTAAGGACAGGTTGATTGAGGCGGATGCCATTAACCAGACAGAATGTTTTGAAGCAGGGCTGTTGTTTGCCGGAGCAGAAGGGGTGATCCCTGCTCCTGAAGCTACACATGCCATTGCTGAAGTGGTTCGGCAGGCAAAACAGGCGGATAAAGAAGGCGTTTCTAAAACGATCTTATTCAACCTGTGCGGTCACGGTCATTTTGATCTTGGCGCATATGAAAACTATCTTGCCGGTAAGCTGGTAGACTATGAAGTGTCGCAGGAAACGATCAATGCATCGCTGGCGGAACTGGCGACACCGGAGATATAG
PROTEIN sequence
Length: 455
MSKQRKITLQESEIPTHWYNILADMPTKPLPPLHPGTGQPIGPEDLAPLFPMELIKQEVSADKWIEIPDEVRDIYSIWRPTPMYRAYGLEKALGTKAKIYYKYEGVSPAGSHKPNTSVPQAYYNMKEGVKKISTETGAGQWGSALSFACKLFGIECEVFMVKVSYEGKPYRKIMMNTWGATVHPSPSNLTNAGRTILAKDPDSPGSLGIAISEAVEVAAMNSDTKYSLGSVLNHVLMHQTVIGLEALKQMEKAGDYPDIVIAPFGGGSNFAGIAFPFLENNLTGGKKVRAIAVEPTSCPKLTRGIFRYDFGDTVGMTPLIPMYTLGHNFIPSPIHAGGLRYHGAGAIVSQLLKDRLIEADAINQTECFEAGLLFAGAEGVIPAPEATHAIAEVVRQAKQADKEGVSKTILFNLCGHGHFDLGAYENYLAGKLVDYEVSQETINASLAELATPEI*