ggKbase home page

SCNpilot_cont_500_bf_scaffold_14302_3

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 1795..3423

Top 3 Functional Annotations

Value Algorithm Source
exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 543.0
  • Bit_score: 716
  • Evalue 5.90e-204
  • rbh
Exonuclease RecJ {ECO:0000313|EMBL:AEW01354.1}; EC=3.1.-.- {ECO:0000313|EMBL:AEW01354.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 543.0
  • Bit_score: 716
  • Evalue 2.60e-203
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037EE6FC similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 544.0
  • Bit_score: 719
  • Evalue 2.20e-204
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1629
ATGGAAAAACGATGGACAATACGGGAAACACCTGTTGAAAAAGCCCGGCAATTAGCCGGGCAGATAAAAATTCACCCGGTGCTCTGCAATATACTTGCGCAGAGAGGAGTGTATGACTACGAAGCAGCCAAAGCATATTTCCGTCCCCAGCTTGCCGGTCTGCATGATCCCATGCTGATGAAGGATATGGACAAGGCGCTCACAAGACTAACGGGTGCTTTTGCAAGAAGGGAAAAAATACTTGTTTTCGGAGACTATGATGTGGACGGCACAACGGCGGTAGCGCTGATGTTTCAGTTTCTTCAAAAAATTTATATCCCACAGCATATATTCTATTATGTACCTCATCGCTACAGAGAAGGATATGGCGTTTCTAAACAGGGAATTGATTTTGCAAAAAAAAATGGTATACAGCTCATTGTCGCTTTAGACTGCGGCATAAAATCAGCTTCACTGGTAGATTATGCCCGGTCTCTGAATATAGATTTTATCATCTGCGACCACCACCTGCCCGACAAAGAGCTTCCCAATGCCGTAGCCATTCTTAATCCCAAACAAACTGATTGTCCTTATCCTTACAAAGAATTATGCGGTTGCGGCATCGGCTTTAAGCTGATCTCTGCATTGGCCAAACGGCTTGAAATGCCTGAATCATCCTGCTATTGTTATCTTGACCTTGTAGCTACTGCAATAGCAGCAGATATTGTTCCCATCACCGGTGAAAACAGGATACTAGCTTATTATGGCATAAAGCAGGCAAATGAAAATCCGTCAGCAGGGATAAAAGCGCTTATGCAACTGAGCGGTTTTCAGAAAGGGATCATTCATGTCAATACTCTCGTATTTGTGATAGCGCCACGTATAAATGCTGCAGGCAGGATGGACGATGCGAAAAAAGCTGTGCAGCTTTTTATTGAACAGGATTATGAGCAGGCGCTTAAACTGGCGGAACTGCTCCATAATGATAATGATGACCGTAAGGAAGCAGACAGCAGTATAACCGAACAGGCATTAAGCATCATTGACAATGACCCTGAGCTGACGGAGCGATATTCCACAGTAGTATTCCAGCCAGGGTGGCACAAAGGGGTAGTGGGGATTGTTGCATCAAGGCTGATTGAAAAATACTACCGCCCAACCGTAGTGCTTACACAAAGCGGCGAAATCGTTGCCGGGAGCGCCAGGAGCGTCCCGGGTTTTAATCTCTATGAGGCGGTACATGAATGCCGGGAGCATCTCTTAGGTTATGGCGGGCACTTTGCAGCGGCAGGAATGACCATGCTCCCCGGGCAGGTGGCATCTTTCAGCCTGAGATTTGAAGAAGCGGTAAGGTCGCGTATCGAACCGGAGCAACGTATCCCGGTAATTAATATTGATGCCGAGCTGAACATCGCAGATATCAAAACCGGATTCTACAATATCATTTGCCAGATGGAACCTTTCGGACCTGACAATCTGCGCCCTGTATTTATTTGCAGGAACCTGACAGATACCGGCTATTCCCGGGTGGTAAAAGAGCAACATATCAGATTTTCGCTGCGCCAGGGAGATTCAACCATTGGAGGGATCGGGTTCCAGATGGCGGATAAATTTCCACTACTGCTTCAGAAAGCGCCCGTTGATATTGTT
PROTEIN sequence
Length: 543
MEKRWTIRETPVEKARQLAGQIKIHPVLCNILAQRGVYDYEAAKAYFRPQLAGLHDPMLMKDMDKALTRLTGAFARREKILVFGDYDVDGTTAVALMFQFLQKIYIPQHIFYYVPHRYREGYGVSKQGIDFAKKNGIQLIVALDCGIKSASLVDYARSLNIDFIICDHHLPDKELPNAVAILNPKQTDCPYPYKELCGCGIGFKLISALAKRLEMPESSCYCYLDLVATAIAADIVPITGENRILAYYGIKQANENPSAGIKALMQLSGFQKGIIHVNTLVFVIAPRINAAGRMDDAKKAVQLFIEQDYEQALKLAELLHNDNDDRKEADSSITEQALSIIDNDPELTERYSTVVFQPGWHKGVVGIVASRLIEKYYRPTVVLTQSGEIVAGSARSVPGFNLYEAVHECREHLLGYGGHFAAAGMTMLPGQVASFSLRFEEAVRSRIEPEQRIPVINIDAELNIADIKTGFYNIICQMEPFGPDNLRPVFICRNLTDTGYSRVVKEQHIRFSLRQGDSTIGGIGFQMADKFPLLLQKAPVDIV