ggKbase home page

SCNpilot_cont_500_bf_scaffold_16863_3

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(2151..2813)

Top 3 Functional Annotations

Value Algorithm Source
UspA n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GYD2_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 216.0
  • Bit_score: 183
  • Evalue 3.10e-43
UspA {ECO:0000313|EMBL:EOR96643.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 216.0
  • Bit_score: 183
  • Evalue 4.30e-43
UspA domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 203.0
  • Bit_score: 97
  • Evalue 4.10e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Arcticibacter svalbardensis → Arcticibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 663
ATGATGAATGAGAGACTCCTGAAATTAAAGCAGTTGCAAAAGAGCATGGAAGAAACAGAGGGCATTACAGTATCGGTACTGCAATATGAAGGATCCATAAAGGAGAATATTATAAAATCATCAACAGATAGTAACGCTGATATTATCATAATGGGAACATTAGGGAATGGCGGCATAAAGGAAAGATTGTGGGGAAGCAGCACAGCTGCCGTAATAGGAGCGAGTAAAATTCCTGTGGTGGCCGTTCCAATAGAATATGATGGTGTTCTTCCTGATAAAATTTTATTCACCACCAATCATTTTGAAGGATCACCCCGGATCCTGGATCCCCTGTTTGAACTTGCCGCCATTAATATGGCACAGGTGTTTGTAGCGCTTTTTTCTTCCGGAAGTACAGAAAATACTACCGTGGCAGAGGATCTTGAGGAATATGGCCAGGAGCTGCAAAAAAGTTACCATGATAAAAGCCTTGTAACAGAGTATTTGACGGGGAATGATTTTGAAAATGCTATAGAACAATATATTAATAAGAATGACATAAAGCTGCTGGCAATGGTAACTTACCAGCGAAGCTTTTTTGAGAGGCTGTTTTACCCGAGCATGTCGAAGAAAATGTCTTACCATACAAGGATCCCGCTGCTGGTTATTCCTGCAGAAAAATAA
PROTEIN sequence
Length: 221
MMNERLLKLKQLQKSMEETEGITVSVLQYEGSIKENIIKSSTDSNADIIIMGTLGNGGIKERLWGSSTAAVIGASKIPVVAVPIEYDGVLPDKILFTTNHFEGSPRILDPLFELAAINMAQVFVALFSSGSTENTTVAEDLEEYGQELQKSYHDKSLVTEYLTGNDFENAIEQYINKNDIKLLAMVTYQRSFFERLFYPSMSKKMSYHTRIPLLVIPAEK*