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SCNpilot_cont_500_bf_scaffold_16359_2

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 429..1013

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NKG8_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 188.0
  • Bit_score: 173
  • Evalue 2.10e-40
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:AHF16917.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 188.0
  • Bit_score: 173
  • Evalue 3.00e-40
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 186.0
  • Bit_score: 138
  • Evalue 3.10e-30

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
ATGCATAGCGAACGATTGTCATACCTGGTATATGCTATTGCTGAAAATGGCGATGAACACGCTTTTGATGAGCTTTTCAGGATATACTATCCCGCGCTGCTGTCTTATGCCTATTCCATATTGAAAGATAAGCAGGATGCAGAAGAGATCTGTCTGGATGTGATGTTTAAACTGTGGCAGAACAGGAAAATATTACCTACCGTCAAAAACCTTTCTCATTATTTATACATTGCCGTCAAGCATTCCTCTATCAGCTATATGCGTACCAAAGGATACAGGGCGTTGCAGAAAAAAATAGGGCTGGAGGAAGCCGGCGAGAGCTTTATCTATGAGTTAGGTAATCATGAGCTGAGAATGATAAATAAGGAAACGCTTGAACGTATCAATACCGCTATCAATACATTGCCCTCACGGTGCAGGCTTATTTTTAAGCTGATCAAGGAAGACGGGCTTAAATATTCAGAAGTAGCGCAACTACTCGAAATATCTGCAAAAACAGTAGAAAACCAGATGACAATCGCCATGAAAAAGCTAACGGCGATCATTGCCGGAATGATGAAGGACCAGGAGAAAAATATTTCTTAG
PROTEIN sequence
Length: 195
MHSERLSYLVYAIAENGDEHAFDELFRIYYPALLSYAYSILKDKQDAEEICLDVMFKLWQNRKILPTVKNLSHYLYIAVKHSSISYMRTKGYRALQKKIGLEEAGESFIYELGNHELRMINKETLERINTAINTLPSRCRLIFKLIKEDGLKYSEVAQLLEISAKTVENQMTIAMKKLTAIIAGMMKDQEKNIS*