ggKbase home page

SCNpilot_cont_500_bf_scaffold_18934_3

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 1814..2788

Top 3 Functional Annotations

Value Algorithm Source
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZEL7_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 292.0
  • Bit_score: 347
  • Evalue 1.40e-92
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN09680.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 292.0
  • Bit_score: 347
  • Evalue 1.90e-92
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 305.0
  • Bit_score: 311
  • Evalue 3.40e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parabacteroides johnsonii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 975
ATGAGAAATGGTAAGTATTTAAAGCAACAATTTTTTATTCGTTGGACCTCCCTTCTTCTACTTTCTTTTTTTTTAAGAACTCCAGTGAGCGCACAGGACATTCCTGTCGCCGGAACAGTAACTGTTGAAAAAACAAATGAGCCTCTGACAGGCGCATCTGTGAAAATAAAAGGAACTGTTACCAGCGTGCTGACAGATGAAAACGGGCGCTTTTCGCTGAAAGTCTCCCCCGCGGGGATATTAGTTATCAGCCATGTAGGTTATGAAACTTTAGAGATGGCGGTGAATAATCGCAGGACAATTAATATTTCCTTGGTAAGCACTTCTGCTGCTTTGGACGAAGTGCTGGTAGTTGGATATGGAACCCAGAAAAAAGTAAACCTGACAGGGGCAGTAGATGTAATCTCAAATAAGAAGATAGAGAACAGGCAATCTACCACAGTATCGCAAATTTTGCAGGGACAATCTCCGGGACTGGATTTTTCGTTAGGGAATAATGGGTTTGAACCCGGAGCCTCCATGAAGATCAATATTCGCGGAGTGGGCTCAGTAAATGGCGGCAGCCCCTATGTTGTCATTGATGGATTTCCGGGGGAAATGGATCGCCTGAACCCGAGTGATATTGAGTCTATCTCTGTGCTCAAAGATGCAGCGGCATCGGCTATTTATGGCGCCAGGGCGCCGTTTGGAGTGATCCTGATCACTACTAAGAGCGGTAAAAAAAATGAAAAATTATCTGTTACTTATTCAGGTAATGTTTCAGTGAACAGTACAGCCAGGCTGCCTAAAATGCTTGACTCTTACACATTTGCCCGGGTCATCAATGAATACGGGGTTAATGGAGGCGGACGTACTTATTCAGATGCGGCGATAGACAGGGTCATTGCCTACCAGGATAAGGACTGGGACTACTTAAAGCAGTTTTATCCGGCAGGTGCAACTTACTATGAAGCTATGCCTCTGGCAAATGGTACA
PROTEIN sequence
Length: 325
MRNGKYLKQQFFIRWTSLLLLSFFLRTPVSAQDIPVAGTVTVEKTNEPLTGASVKIKGTVTSVLTDENGRFSLKVSPAGILVISHVGYETLEMAVNNRRTINISLVSTSAALDEVLVVGYGTQKKVNLTGAVDVISNKKIENRQSTTVSQILQGQSPGLDFSLGNNGFEPGASMKINIRGVGSVNGGSPYVVIDGFPGEMDRLNPSDIESISVLKDAAASAIYGARAPFGVILITTKSGKKNEKLSVTYSGNVSVNSTARLPKMLDSYTFARVINEYGVNGGGRTYSDAAIDRVIAYQDKDWDYLKQFYPAGATYYEAMPLANGT