ggKbase home page

SCNpilot_cont_500_bf_scaffold_26980_3

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(1685..2014)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000380A2A6 similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 100.0
  • Bit_score: 115
  • Evalue 3.90e-23
XRE family transcriptional regulator {ECO:0000313|EMBL:KIX19617.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 103.0
  • Bit_score: 104
  • Evalue 1.30e-19
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 99.0
  • Bit_score: 91
  • Evalue 1.40e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium sp. 316 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 330
TTGCGCGATGACGGGGACAAAAGCCTCTCCAGGGATGACCTGGCTAAAGCCGTTGGCACTTCATCGGCCATCATCGGACGCTATGAACGCAATGAGATCACCCCTTCCGTGGAAGTGGCTGCAAAGATTGCTGACGCCCTCGATGTATCGCTGGATTACCTGGTAGGCGCTTCTTCTTTTGTAGTGAAGGATAAAAAAATGCTCCACCGCCTGGAGCTGCTGGAGAAAATTGAGGACGATGACAGGGAAACAATTTTAAAAGTAGTAGATAACTATCTTACCTCCGCTCAACTACAATCAACTACTAAAAAGCTAAAGCAAAAAGTTTAA
PROTEIN sequence
Length: 110
LRDDGDKSLSRDDLAKAVGTSSAIIGRYERNEITPSVEVAAKIADALDVSLDYLVGASSFVVKDKKMLHRLELLEKIEDDDRETILKVVDNYLTSAQLQSTTKKLKQKV*