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SCNpilot_cont_500_bf_scaffold_26454_3

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 1005..2168

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EC72_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 388.0
  • Bit_score: 656
  • Evalue 1.30e-185
  • rbh
xylose isomerase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 388.0
  • Bit_score: 656
  • Evalue 4.00e-186
  • rbh
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AEI47603.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 388.0
  • Bit_score: 656
  • Evalue 1.80e-185

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1164
ATGCAGGTAGAAAAATATACTACAGACAGCCATAATGAAGCATTACTGAAGGAGCATAAACGCAGGCTGGACTATATTACAGCAGCCGTAAATGATGCGGAAAAGATCATCCAAAAGCTCACAGCATTCCAGGTAGCTATTCCCAGTTGGGCGTTGGGTACCGGCGGCACGCGTTTCGGACGGTTTTCCGGGGGCGGTGAACCGCGCAACCTGGAAGAGAAAATTGAAGATATCGGTTTGCTGCACAAGTTAAATCAATCCAGCGGGGCTATATCACTACATATTCCCTGGGATATTCCTGAGAATGCGTCGCATATTAAAGCGCTGGCAGCCCAGAACGGACTGCGTTTTGATGCAATGAATTCCAATACTTTCCAGGATCAGCCGGGACAGGAGCTGAGCTATAAATTCGGCTCTTTGCAAAACGTAAATAAGGCTATCCGTCAGCAGGCCATTGACCACAATATTGAAGTGATAAAATACGGCATTGAATTAGGCTCTAACTCATTGACCGTATGGTTGTCGGATGGTTCATGTTTCCCGGGTCAGTTGAATTTCAGGGAAGCATTCCAGCATACGTTGAGTGGATTGCAGGAGATATATAAGGCGCTTCCTGCCGATTGGAAAATATTTGTAGAATATAAAGCTTACGAGCCTAATTTCTATTCCACCACCGTTGGCGATTGGGGACAATCATATTTGTATTCAAGCAAGCTTGGACCGAAAGCATATACGCTGGTTGACCTTGGTCATCATTTGCCCAATGCAAATATCGAACAGATCGTTGCGCTGTTGCTGATGGAAGGAAAGCTGGGCGGTTTTCATTTCAATGATTCCAAATACGGAGATGATGATCTGACAACCGGTAGCATTAAGCCGTATCAGCTATTCCTCATCTTTAACGAGCTTGTAGAAGGCATGGATGCCAAAGGTATGGATCATGTGTCGGATATGGGTTGGATGATAGACGCCTCGCATAATGTAAAAGATCCGCTGGAAGATCTGCTGCAATCTGTAGAGGCTATTATGTTAGCTTATGCGCAGGCACTGTATGTTGACAGAAAAGCATTAAAAGATGCGCAGCAAAATAATGATGTAGTGGCAGCACAGGAAATATTGCAAAATACTTTCCGTACTGATTTGCGGGTTCTTGTGGCCGAAGCA
PROTEIN sequence
Length: 388
MQVEKYTTDSHNEALLKEHKRRLDYITAAVNDAEKIIQKLTAFQVAIPSWALGTGGTRFGRFSGGGEPRNLEEKIEDIGLLHKLNQSSGAISLHIPWDIPENASHIKALAAQNGLRFDAMNSNTFQDQPGQELSYKFGSLQNVNKAIRQQAIDHNIEVIKYGIELGSNSLTVWLSDGSCFPGQLNFREAFQHTLSGLQEIYKALPADWKIFVEYKAYEPNFYSTTVGDWGQSYLYSSKLGPKAYTLVDLGHHLPNANIEQIVALLLMEGKLGGFHFNDSKYGDDDLTTGSIKPYQLFLIFNELVEGMDAKGMDHVSDMGWMIDASHNVKDPLEDLLQSVEAIMLAYAQALYVDRKALKDAQQNNDVVAAQEILQNTFRTDLRVLVAEA