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SCNpilot_cont_500_bf_scaffold_31277_2

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 1388..1900

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 170.0
  • Bit_score: 213
  • Evalue 5.10e-53
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 170.0
  • Bit_score: 213
  • Evalue 2.30e-52
tRNA pseudouridine synthase A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB28_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 170.0
  • Bit_score: 213
  • Evalue 1.60e-52

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 513
ATGGGCACCGCTTATGCCGGTTACCAAATGCAGGAAAATGCGAACACGGTACAGGCAGAAGTTGAAAAGGCATTGCAGATCTATTTTAAAAGAAGCATTTCCCTTACAGGATCGTCACGTACAGATGCAGGGGTACATGCGTTGCAGAATTTTTTTCATTTGGATTGTGAGTTTACAATACCTCAGGAAAAAATATATAATCTTAATGCATTATTACCGCCCGATATTGCTATCAGGTCAATAGTAGAAGTAGCCGCAGGTGCACATTGCCGGTTTGATGCCCAAAGCCGGGAGTATAAATATTTCACTTATAGCAAAAAAGATCCCTTTCTCTCCGGCAGGGCGTATTATTTTCCATATACCATAGATAAAGCTCTTTTGCAAAATGCCGCGGCGGTGGTAAAGGAATACCGGGATTTCAGCAGCTTTTCAAAAAGAAATACCCAGGTCAAAAATTTCAACTGCGAGATCATCGAAAGTGAATGGCAAACAGAAGGAGATGCCCTAATATAT
PROTEIN sequence
Length: 171
MGTAYAGYQMQENANTVQAEVEKALQIYFKRSISLTGSSRTDAGVHALQNFFHLDCEFTIPQEKIYNLNALLPPDIAIRSIVEVAAGAHCRFDAQSREYKYFTYSKKDPFLSGRAYYFPYTIDKALLQNAAAVVKEYRDFSSFSKRNTQVKNFNCEIIESEWQTEGDALIY