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SCNpilot_cont_500_bf_scaffold_36005_2

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(744..1088)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega n=1 Tax=Segetibacter koreensis RepID=UPI000382E9B0 similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 114.0
  • Bit_score: 192
  • Evalue 2.60e-46
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 114.0
  • Bit_score: 186
  • Evalue 5.90e-45
DNA-directed RNA polymerase, omega subunit {ECO:0000313|EMBL:AEW01350.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 114.0
  • Bit_score: 186
  • Evalue 2.60e-44

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 345
ATGAGCAGATTAAGAAAACAATGGGGGGCAAATACTACAACTAATGTGGTGGAAACCAAGAATGTAGTGGATATTAAGGCGAAAACCGGGAATTTGTATGAATCAATTTCCATTATAGCCAAAAGAGCAAACCAGATAAATATTGCGCTCAAGGAAGAACTGCACAATAAGCTGGAAGAGTTTGCGAGCCATACGGATAGCCTTGAGGAAATTCACGAGAATAAAGAACAGATCGAAATTTCAAAGGCTTATGAGAAAATGCCTAATCCGGCTTTGTTGGCTACACAGGAATTTTTTGATGATAAAATATACTTCAGAAAAGGGGATAATGATCTTTTCAGCTGA
PROTEIN sequence
Length: 115
MSRLRKQWGANTTTNVVETKNVVDIKAKTGNLYESISIIAKRANQINIALKEELHNKLEEFASHTDSLEEIHENKEQIEISKAYEKMPNPALLATQEFFDDKIYFRKGDNDLFS*