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SCNpilot_cont_500_bf_scaffold_39206_4

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(1064..1384)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU87_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 106.0
  • Bit_score: 151
  • Evalue 3.60e-34
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 106.0
  • Bit_score: 151
  • Evalue 1.10e-34
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 106.0
  • Bit_score: 151
  • Evalue 5.10e-34

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 321
ATGGACGCAAAAGTTATCAGAAGACAAAAGATCAGATATAATATCCGCAAAAAGATATCTGGTACATCGCAAAAGCCCAGGCTGTCAGTATTCAGAAGCAATACTGATGTATATGCGCAATTGATTGATGATGAAACCGGTAAAACACTTGCTGCCGCTTCTTCAAAAGATAAGGATATCCAGGCGCAGAAAGCGCCCAAAGTAACGCTTAGCGGGCTTGTGGGGAAAGCTATTGCAACAAAAGCTACAGCGCTTGGCATCACTGCTGCTGTGTTTGACCGTGGCGGATACCTGTATCACGGACGTATTAAAGCAGTCTGA
PROTEIN sequence
Length: 107
MDAKVIRRQKIRYNIRKKISGTSQKPRLSVFRSNTDVYAQLIDDETGKTLAAASSKDKDIQAQKAPKVTLSGLVGKAIATKATALGITAAVFDRGGYLYHGRIKAV*