ggKbase home page

SCNpilot_cont_500_bf_scaffold_41182_2

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 924..1529

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.6
  • Coverage: 199.0
  • Bit_score: 83
  • Evalue 3.20e-13
PAS domain S-box protein id=3714060 bin=GWB1_CP_36_13 species=Leptospira interrogans genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 24.1
  • Coverage: 187.0
  • Bit_score: 75
  • Evalue 8.20e-11
PAS/PAC sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 66.0
  • Bit_score: 66
  • Evalue 1.60e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hymenobacter sp. DG25B → Hymenobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 606
ATGGATACTGCACACAATCTTGCAGACGTATTAAAAAAAGACTTTTTAGTGGCTTTGTGCAACGGCATTAAGGAAGGTGCGGCTATAATTGAGAAAATATCGGGAAAAATCATTTTTTGTAATAGCGCCTGGAGCGAAGTATTTGATGTCAATCCATCTGATAATATCAGCCTGTTACCTGTTTTTGCATCAAGAAAAAAAAAGCTGACTGATAAGCAGCTTTTATATCGTATAAGAGTAGCCGAAGAAGGTTCTTTCCATGAACAGGTAGAATATGTGTCAAAAAATGGAAAACTATTTTGGGGAGAACTGATCTTCAGGGCATTTACCAACAACAACAGATCATATTACCTGGCTGTGATTGACAGAATAGATACCATGAAAGAAAATGAACAAAGGATAGCTCAGGAGAAACAACGGCTAGAGGCTGTGCTGGAACATACCTGCATGGGCATTTTGGAAATAAATAAAGAAGCTGAGATCGTAAGTATTAACCGTTTCGGCTTAACATTATTTGGGTACAAAAAGGAGGAAATTATAAACAGGAAGATTGAAGTATTAATTCCGGAAAGATTTCATTTAAAACATTTACATCACAGGGAGAAA
PROTEIN sequence
Length: 202
MDTAHNLADVLKKDFLVALCNGIKEGAAIIEKISGKIIFCNSAWSEVFDVNPSDNISLLPVFASRKKKLTDKQLLYRIRVAEEGSFHEQVEYVSKNGKLFWGELIFRAFTNNNRSYYLAVIDRIDTMKENEQRIAQEKQRLEAVLEHTCMGILEINKEAEIVSINRFGLTLFGYKKEEIINRKIEVLIPERFHLKHLHHREK