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SCNpilot_cont_500_bf_scaffold_43553_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(22..732)

Top 3 Functional Annotations

Value Algorithm Source
GntR domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y411_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 232.0
  • Bit_score: 329
  • Evalue 2.80e-87
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 232.0
  • Bit_score: 329
  • Evalue 8.90e-88
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 232.0
  • Bit_score: 363
  • Evalue 3.20e-97

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Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 711
ATGGTTGATGAAGCTTTAAAAACCGAATTAAAACTGGTGGACACAAGCTCGCTGGTGGACAAAGTAGTGGAGCGTTTGGTGGATCTGCTCCAGCAAAAAAAGCTGAAAGTAGGAGATTCTATTCCGAAAGAACTTGAGCTGGTAGAAACCCTGGGCGTAAGTCGTACGGTAATACGTGAAGCGTTGACAAGATTGAAGATGATGGGGCTGATAGAAACCAAAAAGAAAAAAGGGTCTGTAATTACCAGCCCCGATCTGTTTGGTATTATGAGCAGAAGCATGAACCCTCATGTGCTTGACCAAACCACACTTAAGGAAATATTTGAAATAAGACTTGTGCTGGAGATCGGGATGGCTGATTTTCTTTTTCACCGTATTACTAAAGAAGACATTAAAGAACTGAGAGAAATTGTGAGCGATGAACCCCCTGTAACGCAACACTATTTATTCAACATAGACCATGAGATACGCTTTCATGGAAAGCTATACGAGATCACAGGTAATGAAGCATTAAAAAAGTTTCAGAAAATGTTGCTGCCGGTTTTTGATTATGTGCACAACAGCAGTCATTTATTAAAAGAACCTCCTCCGTTCAAAACCTTTGTATCCCACACCCAGCTGGTAGACATACTGGAGCATGGCACGCCCGAAGAGTTTCGCAATGGCATGAGGGCGCACCTGGAAAATCATTTTGCGAGATTGTTTGCATAG
PROTEIN sequence
Length: 237
MVDEALKTELKLVDTSSLVDKVVERLVDLLQQKKLKVGDSIPKELELVETLGVSRTVIREALTRLKMMGLIETKKKKGSVITSPDLFGIMSRSMNPHVLDQTTLKEIFEIRLVLEIGMADFLFHRITKEDIKELREIVSDEPPVTQHYLFNIDHEIRFHGKLYEITGNEALKKFQKMLLPVFDYVHNSSHLLKEPPPFKTFVSHTQLVDILEHGTPEEFRNGMRAHLENHFARLFA*