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SCNpilot_cont_500_bf_scaffold_43731_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(3..389)

Top 3 Functional Annotations

Value Algorithm Source
Mechanosensitive ion channel component n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SLQ9_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 129.0
  • Bit_score: 151
  • Evalue 5.70e-34
Mechanosensitive ion channel component {ECO:0000313|EMBL:ESU27374.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 129.0
  • Bit_score: 151
  • Evalue 8.10e-34
mscC4; protein MscC4; K03442 small conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 129.0
  • Bit_score: 113
  • Evalue 5.40e-23

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Taxonomy

Flavobacterium limnosediminis → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 387
GTGACGGGTACGGTTACAGAGCAGGGGGTTTTTAGCACCACCCTCCTTACTCCCGATCATAAAACAGTAATACTTCCCAATGGCCCCTTATCTACAGGAGTAATTACAAATTACAACACGCATGGCAATCTTCGTGTAGACCTTAGTATGGCGATAGATCCGGGTGTGTCTGTTGAAAAAGCCCGCAGCGTTGCGATCGCTGCAATGCAGCAGTATCCCAAAGTGCTGGCAGACCCCGGACCGGAAGTCAGCGTATTAAAGGTTGGCGACGGGATGACTACACTTGCTATAAGACCTTATACCACACAGGCGGATTACTGGGATGTATACTTTGGTGTGCAGGAAGCAGTAAAGGCAGCCTTTGACACAAATGGCATCCCGGGACCA
PROTEIN sequence
Length: 129
VTGTVTEQGVFSTTLLTPDHKTVILPNGPLSTGVITNYNTHGNLRVDLSMAIDPGVSVEKARSVAIAAMQQYPKVLADPGPEVSVLKVGDGMTTLAIRPYTTQADYWDVYFGVQEAVKAAFDTNGIPGP