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SCNpilot_cont_500_bf_scaffold_55299_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 1..582

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase Rsu; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 193.0
  • Bit_score: 310
  • Evalue 3.50e-82
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 193.0
  • Bit_score: 310
  • Evalue 1.60e-81
Pseudouridine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT1_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 193.0
  • Bit_score: 310
  • Evalue 1.10e-81

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 582
AAAAAAATATCGCTGCAGAAAAACCTGGTATATATACTGCTGAATAAGCCCAAAGACTATATTACCACTACCGATGATCCCGAAGGAAGAAAAACAGTAATGGACTTAATTAAAAAAGCTACCCCGGAAAGAGTGTTTCCCGTAGGAAGGCTGGACAGGAATACCACGGGAGTGATGCTGCTCACCAATGATGGCGAGCTTGCACAGCGGCTTACTCATCCCAAATACGAAGTAAAAAAAATATATGAGGTAAAGGTAGACCAGCCCGTGACCAAACAACAGTTAGATACCATTGCATCAGGCATTACTCTTGAAGACGGGTTTATCCAGCCCGATGCCGTAGCGTATGCCGATGTCAAAGATAAAAGCGTCATAGGCATTGAGATCCACAGCGGGCGCAACCGTATCGTACGGCGTATTTTTGAGCACATGGGCTTTAAAGTGAAAAACCTCGACCGGGTAATGTATGGCATCTTTACCAAGAAAAACGTGGACCGGGGCAAATGGCGCTTTCTTACCGAGAAAGAAATACGCCTGCTCAAGCACCTGAATACTTCTTTCCGCAACAAAAAACCCGCCTGA
PROTEIN sequence
Length: 194
KKISLQKNLVYILLNKPKDYITTTDDPEGRKTVMDLIKKATPERVFPVGRLDRNTTGVMLLTNDGELAQRLTHPKYEVKKIYEVKVDQPVTKQQLDTIASGITLEDGFIQPDAVAYADVKDKSVIGIEIHSGRNRIVRRIFEHMGFKVKNLDRVMYGIFTKKNVDRGKWRFLTEKEIRLLKHLNTSFRNKKPA*