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SCNpilot_cont_500_bf_scaffold_66714_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(3..1010)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 336.0
  • Bit_score: 571
  • Evalue 6.50e-160
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 337.0
  • Bit_score: 551
  • Evalue 2.00e-154
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Segetibacter koreensis RepID=UPI0003677F0A similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 337.0
  • Bit_score: 559
  • Evalue 1.80e-156

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1008
AACCTCGCTACAGGTTATGTCGCTCAAAAAGGAGATGCAGTAGGAATTATAGCAGCACAATCTATCGGTGAACCTGGTACACAGTTGACACTTCGTACCTTCCACGTGGGTGGTGTTGCCGGTTCTGCAACCGTTGACTCGCAGCTTACAGCCAAATTTGACGGTACCGTTCAGTTCGACGGACTTCGTACTGTAGCTTCGGAAAATGCCGGCGGCGAGAAGACCCAGGTTGTTATCGGCCGTACCGGGGAGCTGCGTATCATTGATGTAAAAAATGACCGCTTGCTGATCACCAACAATATTCCTTACGGATCAATCCTGATGGTAAAAGACGGCCAGCAGGTAAGCAAGGGCGATGTGATCTGCACATGGGATCCGTTCAATAATGTAGTTATTTCCGAGCAGAGCGGTGTGGTTAAGTTTGAAAGCATCATAGAAGGTGTGACCTTCCGTGAAGAAGCGGATGAGCAGACCGGCCACCGTGAGAAAGTGGTTATTGAAACAAAAGACAAGACCAAGATCCCGATGCTCACCGTAGAAGGAAAAGAGCTAAAAACATATAATCTTCCGGTAGGCTCGCATATCTCTGTGGAAGAAGGAGAAGAGGTGCGTGCCGGCGAAGTAATGGTGAAGATACCGCGTGTGTTGGGTAAGCTGCGTGATATCACGGGTGGTTTGCCGCGTGTAACAGAATTATTTGAAGCGCGTAACCCCGGCAATCCTGCTGTTGTTTCCGAAATTGACGGTGTGGTAACCTTTGGCGCTGTTAAGCGTGGTAACCGCGAGATCATTATTGAAGCGAAAGACGGTGTGGTAAAAAAATACCTTGTTCCGCTGACCCGCCAGATCCTCGTGCAGGACGGCGACTTTGTAAGGGCAGGTACGCCAATGTCTGATGGTCAGACCGCACCGGCAGATATCCTTAATATCAAAGGACCTTACGCCGTGCAGGAATATGTAGTGAACGAGATCCAGGAAGTATACAGGTTACAGGGTGTACGTATCAAC
PROTEIN sequence
Length: 336
NLATGYVAQKGDAVGIIAAQSIGEPGTQLTLRTFHVGGVAGSATVDSQLTAKFDGTVQFDGLRTVASENAGGEKTQVVIGRTGELRIIDVKNDRLLITNNIPYGSILMVKDGQQVSKGDVICTWDPFNNVVISEQSGVVKFESIIEGVTFREEADEQTGHREKVVIETKDKTKIPMLTVEGKELKTYNLPVGSHISVEEGEEVRAGEVMVKIPRVLGKLRDITGGLPRVTELFEARNPGNPAVVSEIDGVVTFGAVKRGNREIIIEAKDGVVKKYLVPLTRQILVQDGDFVRAGTPMSDGQTAPADILNIKGPYAVQEYVVNEIQEVYRLQGVRIN