ggKbase home page

SCNpilot_cont_500_bf_scaffold_4312_9

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: 6902..8134

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PE15_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 406.0
  • Bit_score: 474
  • Evalue 9.40e-131
  • rbh
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKS36603.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 406.0
  • Bit_score: 474
  • Evalue 1.30e-130
hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 408.0
  • Bit_score: 468
  • Evalue 2.10e-129
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1233
GTGACCACACTGATCGACCGAGCCGACATCGAAGCGGTCTATCGCCACGAGGCGGGGCGCGTGCTGGCCACGCTCATCCGCCTCGTCGATGATTTCGAAATGTCCGAGGCAGGCGCGCAGGATGCCTTCGAGGCGGCGCTCAAGCGCTGGCCGCAGATGGGGCTGCCCGACAATCCGCGCGCCTGGCTGGTCAATACCGGCCGCCACAAGGCCATCGACCGCATCCGGCGCCGCGTCACGCTGCGCGGCAAGCTGAAGACGCTGGCCGCCGAGGGCGCCATTGCCGGGCCGGAGGCCGAGCTCGACGAGATCGAGGACGATCGGCTGCGGCTGATCTTCACCTGCTGCCACCCGGCGCTGGCGCTCGAAACCCGGGTGGCGCTGACCCTGCGCACCGTGTGCGGACTGAGCACGGCGGCCGTGGCCAGCATCTTCCTCGTCAGCGAGGAGACCATGGCGCAGCGCCTGGTGCGCGCCAAAGCCAAGATCCGCGACGCCGCCATCCCCTATGAAGTGCCGGCGCATGAGCACCTCGCCGAGCGGCTCGCCGGCGTGCTGGCGGTGGTCTACCTGGTATTCACCGAGGGCTATGCCCCCAGCACCGGCGCCGCAACCACCCGCCCCGAACTCTGCGCCGAGGCGATCCGGCTTTGCCGGCTGCTCGACCAGCTCCTGCCGGGCGAACCTGAGATCGCCGGCCTCCTCGCCCTGATGCTGCTGCATGCCGCCCGGCTCGACGGGCGGAGCGACGGCGCCGGCGAGTTGCTGCTGCTCGAAGAGCAGGATCGAACCCGCTGGGACCGCGCCGCCATCGCCGAAGGCAAGGCGCTGGTCGAGCGCGCCCTGGGGCAACCGCGCCGCATCGGCCCCTATGGCGTGCAGGCGGCGATCGCGGCGCTGCATGCCGATGCCGCGAACTTCGCCGCAACCGACTGGCCGCAGATTTCCGCGCTCTACCAGGTGCTGCTGCGCCTCGCCCCCACCCCGGTGGTCGAACTCAATGCGGCGGCCGCGCTATCGATGGTCGATGGACCCGAGCGGGCCCTGCAGCTGGTCGATGCCCTGGCCGCCAGCGGCGCACTCGACGGCTACTGGCCGCTCCACGCGGCGCGCGCCGACCTGCTCGACCGGCTGGGGCGGCAAGCCGAAGCGCAGGCGGCCTATGCCCGCGCCCTGCCGCTGGTCCGGCTCGAGGCGGAGCGGCGACTGCTGGAGCGCAAGATGCGGGGGTGA
PROTEIN sequence
Length: 411
VTTLIDRADIEAVYRHEAGRVLATLIRLVDDFEMSEAGAQDAFEAALKRWPQMGLPDNPRAWLVNTGRHKAIDRIRRRVTLRGKLKTLAAEGAIAGPEAELDEIEDDRLRLIFTCCHPALALETRVALTLRTVCGLSTAAVASIFLVSEETMAQRLVRAKAKIRDAAIPYEVPAHEHLAERLAGVLAVVYLVFTEGYAPSTGAATTRPELCAEAIRLCRLLDQLLPGEPEIAGLLALMLLHAARLDGRSDGAGELLLLEEQDRTRWDRAAIAEGKALVERALGQPRRIGPYGVQAAIAALHADAANFAATDWPQISALYQVLLRLAPTPVVELNAAAALSMVDGPERALQLVDALAASGALDGYWPLHAARADLLDRLGRQAEAQAAYARALPLVRLEAERRLLERKMRG*