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SCNpilot_cont_500_bf_scaffold_8042_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: comp(589..1146)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037FE2BC similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 184.0
  • Bit_score: 155
  • Evalue 7.50e-35
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 186.0
  • Bit_score: 147
  • Evalue 3.80e-33
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACY98490.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 186.0
  • Bit_score: 147
  • Evalue 1.70e-32

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Taxonomy

Thermomonospora curvata → Thermomonospora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGCAGAAGGACAGCAAGACGCGAATGATCGAGAGCGCGGCGGCGTTGATCGCGGCCCGCGGGGTCAATGCCTCCTCGTTCTCCGAAGTGCTGGAAGCGAGCGGCGCGCCGCGCGGGTCGATCTATCATCACTTTCCGGAAGGCAAGTCGCAGCTTGCCGCCGCGGCGGTGCGCTGGACCTCGGAGCGGGTGCTGGCCTTTCAGCGCGCCTATGATGGGAGCACGCCGCAGGGAGTGCTCGAGCGCTTTATCGGCATGTGGCGCAACGTGGTGCTGCGCTCGCATGGCGCCTCGGGCTGCGTCGTCGCCGGCGTGGCGATCGACAGCGTCGCCGACGATGTCGAGCTGCTGCAACTGGTCCGAAGCACCTTCCGCGACTGGCTGGCGCTGCTGACCGCGCAACTTCAAGCCACCGGGTTGCCCCCCGACCGTGCCGCCTCGGTGGCGCTGATGACGCTGGCCGGCATGGAGGGAGCGCTGATCCTCTGTCGTGCCGAAGGCGGTGTGGCTCCGCTCGACCAGGTGGCGTCGGAGCTGCTGCAGCTGGTCCAAACGTGA
PROTEIN sequence
Length: 186
MQKDSKTRMIESAAALIAARGVNASSFSEVLEASGAPRGSIYHHFPEGKSQLAAAAVRWTSERVLAFQRAYDGSTPQGVLERFIGMWRNVVLRSHGASGCVVAGVAIDSVADDVELLQLVRSTFRDWLALLTAQLQATGLPPDRAASVALMTLAGMEGALILCRAEGGVAPLDQVASELLQLVQT*