ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_cont_500_bf_scaffold_23018_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: 889..1542

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=gamma proteobacterium SCGC AAA001-B15 RepID=UPI0002485ACD similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 217.0
  • Bit_score: 167
  • Evalue 1.70e-38
Uncharacterized protein {ECO:0000313|EMBL:KFL27669.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 217.0
  • Bit_score: 287
  • Evalue 1.60e-74
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 209.0
  • Bit_score: 104
  • Evalue 4.30e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia sp. 17-2-E-8 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGTCTGACGTCCGCAACGACAACGAAGGGTACCGCCGCTTCCGCAAGGCGATGAACGACGGCACGCTGGAAGCCGGCATGGTGGTGACCCAATCCGAGCTCTGCGACCTGCTCGGCCTGTCGCTGTCGCCGCTGCGCGAAACGCTGGTGCTGCTGGAGGAGTTCGGGCTGGTCGAGATCAAGCCGCGCGCCGGCATCAAGATCGTCTACCCGGAGGTGGCGTTCATCCGCGAGAACTACCAGTTCCGCATCATGATCGAGATCTTTTCGCTCAAGAGCTTCGGTGACACCGTCTCGGACGCCTGGCTGGCCGACATGCGGACGAACCACGAGAAGTGCCGCATCAGCCTCACCGACGGCAGCCCTTTCGAGACGGCGCATACCCCGTTCCTCGAACTCGATGGCCGGATGCACCGCGAGATCGTCGCCTCGCTCGGCAACCGCGCCATCCTCGATACACACGAGCGCCTGCAGGAAAATATCCGCATGGCGCAACGCGTCCACCGCCGCCCCGGCTTCCGCGGCTACCTGGTCGACACCGTCGACGAGCACATGCGGGTCATCGCAGCGCTGGAACAGCGCGACGTCGCCGGGGCGATTGCGGCGATGGAAGCCCACTTCCAGGGCTCGACGCACCGGACGTTTGCGGCGTGA
PROTEIN sequence
Length: 218
MSDVRNDNEGYRRFRKAMNDGTLEAGMVVTQSELCDLLGLSLSPLRETLVLLEEFGLVEIKPRAGIKIVYPEVAFIRENYQFRIMIEIFSLKSFGDTVSDAWLADMRTNHEKCRISLTDGSPFETAHTPFLELDGRMHREIVASLGNRAILDTHERLQENIRMAQRVHRRPGFRGYLVDTVDEHMRVIAALEQRDVAGAIAAMEAHFQGSTHRTFAA*