ggKbase home page

SCNpilot_cont_500_bf_scaffold_28216_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: 2..1654

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane autotransporter barrel domain-containing protein n=1 Tax=Rhizobium sp. CF142 RepID=J2AZ59_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 574.0
  • Bit_score: 580
  • Evalue 1.60e-162
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:EJJ28855.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 574.0
  • Bit_score: 580
  • Evalue 2.30e-162
serine proteinase similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 360.0
  • Bit_score: 252
  • Evalue 3.20e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1653
GACGGCACCAACTGGTATTTCTCAGGCACCAAATCGCTGGAAATCACCGACGGCGCCTACAACACCATCCTGATCGACACCAACGCGATCCTCTCGCAACTGGGGCTCGCGAACGGCTACACCGATGTCACGCTCAACCACGTCGGCGACATCGACTATGCCAATGGCAAGCTCTACATCTCGCTGGACTCGACGCAGCGCGATCCGATCACCGGCGACAAGTACTCCAACCCGGTCTTTGCGGTCTACGATGCGCAGACGCTGACCTGGACCGGCGAGGCCTACACCGTGAACCCGCCGCACGGCATCAAGGATATCGCCAGTTGGGTGGCGGTGGATGCCGAAGCGGGGCTTGCCTACGGCATGGCCTATGACAACGCCACCGAGCTCGCGGTCTACAACCTCGCCGATTTCAGCTTCAAGCAGTACATCCCGCTCTCGCAGGTGGTGGACCAGGCGCAGGGCGGCAAGCTGCTCAACGGCTACATGTATTTCGCCACCGACAACGACGAAAAGCTGCTGATGCGCGCCAACCTCGCTACCGGCGAGGTCGAGACCATCGGCAACCTGAAGATCGACGGCGAGCAGGAAGTGGAAGGCCTGTCGATCCGCTGGACCAAGGACGGCTGGTCGATGAACGTGCTCAACCGCGAAGAGAGCACCCCGGGCAGCGGCGAGGAAGGTGTCGGCTTCTACAAGTATCTCCGCCCCACCGGCAACACGCTGTCGGGTGAGATCCATGCCGATATCGCCGGCGCCCTGCTTGCGGATAGCCGCCTCCTGCGCGAAGCGACGCTGCGCCGCCTGAATGGCGCTGCAGCCTCGACCGACGGCCCGGTGTTCTGGGGTGAGGCGCAGGCCTCGACTGGTCGCACCGATGCGGTCGGCGACGCGGCGAGCTTCGAGCGGAACTCCGCCGGCTTCATCGGCGGCATCGAAAGCTCGGTCGGCGACTGGCTGGTCGGCCTCACCGCCGGCTATGCTCGCTCGACCTTCGGCGTCGACGATCGCGCCTCGAGTGCCACCAGCGACACCTACCAGTTCGGTATCTATGGTGGTGCCGAGTTCGGCGATCTCGGCCTCAAGCTGGGCGCCGCCTTCGCGGCGCATGACATCTCGACCGAGCGCAGCGTCATCTTCCCGGCCTTCAGCGAACAGCTCTCGGCCGAGTATGGCGCCGGAACCGTGCAGGCCTATGGCGAACTCGACTACCGCCTCGATCTGGGCGCCGCGGTGCTGTCGCCTTTCGCCGGCCTCGCCATCGTCTCCCGCTCGACCGACGCGTTCCAGGAGACCGGTGGCAGCAACGCGGCGCTGTCAGCCGAGCGGTCGTCGGACCAGAACGCCTTCACCACGGTCGGCGTCCGGGTTGTCGCCCCGCTCGGCTTCGGCGAAGCGACCGGCAACCTGCATGGACAGATCGGCTGGCAGCATGCGCTCGCCGACACCCAATCGGCGGTCGAGCTGGCCATCCCCAGTGGCGCCTCGTTCGACAGCGTCGGCGTGCCGATCGCCAGGGACGCCCTGAGTCTGGAGGCCGGGCTCGACCTCGCCCTGAGCGCCGAGGCCACGCTGACCGCCAGCTATTCCGGCCAGCTCGCCGAAGGCACCCAGAACCACAGCGTCAAGCTCGGCTTCGGCCTGAAGTTCTGA
PROTEIN sequence
Length: 551
DGTNWYFSGTKSLEITDGAYNTILIDTNAILSQLGLANGYTDVTLNHVGDIDYANGKLYISLDSTQRDPITGDKYSNPVFAVYDAQTLTWTGEAYTVNPPHGIKDIASWVAVDAEAGLAYGMAYDNATELAVYNLADFSFKQYIPLSQVVDQAQGGKLLNGYMYFATDNDEKLLMRANLATGEVETIGNLKIDGEQEVEGLSIRWTKDGWSMNVLNREESTPGSGEEGVGFYKYLRPTGNTLSGEIHADIAGALLADSRLLREATLRRLNGAAASTDGPVFWGEAQASTGRTDAVGDAASFERNSAGFIGGIESSVGDWLVGLTAGYARSTFGVDDRASSATSDTYQFGIYGGAEFGDLGLKLGAAFAAHDISTERSVIFPAFSEQLSAEYGAGTVQAYGELDYRLDLGAAVLSPFAGLAIVSRSTDAFQETGGSNAALSAERSSDQNAFTTVGVRVVAPLGFGEATGNLHGQIGWQHALADTQSAVELAIPSGASFDSVGVPIARDALSLEAGLDLALSAEATLTASYSGQLAEGTQNHSVKLGFGLKF*