ggKbase home page

SCNpilot_cont_500_bf_scaffold_36748_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: 2..667

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0WJR3_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 207.0
  • Bit_score: 245
  • Evalue 5.00e-62
PAS domain S-box {ECO:0000313|EMBL:EJC85713.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 207.0
  • Bit_score: 245
  • Evalue 7.10e-62
sensor histidine kinase/response regulator hybrid protein similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 206.0
  • Bit_score: 243
  • Evalue 4.60e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
GATCGGCCGGGGAATTATGTGGTGCTGAGAGTGGTCGACGAAGGAGAAGGCATGGACGAAGCGACGCTGGCCAAGGCGACCGAGCCGTTTTTCACTACCAAGGGCGTCGGCAAGGGCACCGGGCTCGGCCTGTCCATGGTGCACGGCCTCGTCGAACAGTCGGGCGGCTTTCTCGAACTGGCGAGTGCGCCGGGCCGCGGCACGACGGCGGCGATCTGGCTGCCGGTGACGCTCGACGAGGGCGAAGCGGCGGTGGCCGCCGAGCCGCCGGTCGATGCACGGCAGGGCCTGCGGGTACTGGCGGTGGATGACGATGCGCTGGTGCTGCTCAACACCGTGGAGATGCTGGAAGCGCTCGGCCATACCGTGATGGAGGCCCATTCCGGCGCGGCGGCGCTCGCAGTGCTCGGGCAGCAGCCGGTCGACCTCCTGATCACCGACCAGGGCATGCCGCAGATGACCGGGGCGGAACTGGCCGAGGCGGTGCGCATCACCTGGCCGGAACGGCCGATCATCGTCGCGACGGGCTATGCCGAGCTGTCGGACCGACGGGCGGCGGCGCTGCCGCGGCTGGCCAAGCCGTTCAGCCAGGAGGACCTGGCATCGGTGATCGCCAGCACGGTCGGCGCCGTGCCGAAGCCCGCCGGCATCGAAACGGCGGCCTAG
PROTEIN sequence
Length: 222
DRPGNYVVLRVVDEGEGMDEATLAKATEPFFTTKGVGKGTGLGLSMVHGLVEQSGGFLELASAPGRGTTAAIWLPVTLDEGEAAVAAEPPVDARQGLRVLAVDDDALVLLNTVEMLEALGHTVMEAHSGAAALAVLGQQPVDLLITDQGMPQMTGAELAEAVRITWPERPIIVATGYAELSDRRAAALPRLAKPFSQEDLASVIASTVGAVPKPAGIETAA*