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SCNpilot_cont_500_bf_scaffold_38680_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: 3..323

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance ABC transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JIJ4_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 104.0
  • Bit_score: 175
  • Evalue 3.10e-41
multidrug resistance ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 104.0
  • Bit_score: 175
  • Evalue 9.70e-42
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEA07894.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 104.0
  • Bit_score: 175
  • Evalue 4.30e-41

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
CTGTCGGGGGGCCAGAAGCAACGCCTCGCCATCGCCCGCATCTTCCTTAAGAACCCGCCGATCCTCATTCTCGACGAGGCCACCTCGGCGCTCGACACCGCCACCGAGTATGCCATCCAGCAGGCGCTAGCCGCGCTGTCGGAAGGGCGCACGACGCTGGTGGTGGCGCACCGGCTGGCCACCATCCGCAATGCCGACCGCATCGTCGTGGTGAGCAGCGAGGGCATCGTCGAGCAGGGCACCCACACCGAGCTGCTCGGCCGGAACGGCGCCTATGCCCGATTGCACGGCGCCCAGTTTGGGCAGCTGGCTAATCCTTGA
PROTEIN sequence
Length: 107
LSGGQKQRLAIARIFLKNPPILILDEATSALDTATEYAIQQALAALSEGRTTLVVAHRLATIRNADRIVVVSSEGIVEQGTHTELLGRNGAYARLHGAQFGQLANP*