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SCNpilot_cont_500_bf_scaffold_44997_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: 3..827

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF69_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 285.0
  • Bit_score: 285
  • Evalue 7.10e-74
Uncharacterized protein {ECO:0000313|EMBL:CDP50043.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 259.0
  • Bit_score: 334
  • Evalue 1.90e-88
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 285.0
  • Bit_score: 285
  • Evalue 2.20e-74

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
GCAGGCGACGTGATCTGCACGCTCGAGGAAGGCACGCGCGCCGCTGCGGTGACGCAGGCGGAAGCGGCGCTCGCGCAGGCCCAGACGGCCTATGACTCCAGCAAGGCGCTGCGCGACAAGGGACTTGCTGCCAGCAATACCGGCATCGCGGCGGAAAGCGCGCTGCGCCAGGCGCAGACGGCCTTCGACCAGGCCAAGCAGGAATATGACCGGGCCAAGGTGACGACCAAGGTCGGCGGGATCGTGCAGGATCCGGTGGCGACGGTCGGCAGCGTGCTGAGCCCGGGCCAGCCGTGCGCCACGGTGGTGGAACTCGACCCGATGCTGTTCATCGCCAATGTTCCGGAAGCCCGCATCGCGCGGGCGGAACTGGGCCTCGTGGCCAAGGTCGAAACGGTGACCGGCCAGACCGCCGAAGGCAAGGTGAGCTACATCGCCTCGCTCGCCGACGACGCGACCCGTTCGTTCCCGATCGAGATCGAGATCCCGAACGCCGACGGCAAGGTGCTGTCGGGCATCACCGCGACCGCCACGGTCACCATGGGCACGGTGCCGGCGCACCTGTTGCCGCAATCGGTACTCACGCTGAATGACGAGGGCACGCTCGGCGTGCGCTCGGTGAAGGACAGCGTCGTCGAGGTCTATCCCGTGACGATCATCTCGGACTCTCGCCAGGGCGTCTGGGTCACGGGCCTGCCCCCGTCGGTCGACGTGATCACGATGGGGCAGGAATATGTCGTGCCGGGTCAGAAGGTCAACGCAACCAACGTTACGGGCAAGCCGGATTCGGTAGAGGCCGAAGCCGCCGCTGAAGGGGTGCACTGA
PROTEIN sequence
Length: 275
AGDVICTLEEGTRAAAVTQAEAALAQAQTAYDSSKALRDKGLAASNTGIAAESALRQAQTAFDQAKQEYDRAKVTTKVGGIVQDPVATVGSVLSPGQPCATVVELDPMLFIANVPEARIARAELGLVAKVETVTGQTAEGKVSYIASLADDATRSFPIEIEIPNADGKVLSGITATATVTMGTVPAHLLPQSVLTLNDEGTLGVRSVKDSVVEVYPVTIISDSRQGVWVTGLPPSVDVITMGQEYVVPGQKVNATNVTGKPDSVEAEAAAEGVH*