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SCNpilot_cont_500_bf_scaffold_44589_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: comp(124..873)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI000382039F similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 196.0
  • Bit_score: 277
  • Evalue 1.00e-71
Tricarboxylate transport transcriptional regulator TctD {ECO:0000313|EMBL:CDP49898.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 195.0
  • Bit_score: 281
  • Evalue 1.00e-72
two-component response regulator protein; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 196.0
  • Bit_score: 276
  • Evalue 9.40e-72

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGGGCAACACGCCACGCTCAAACCAGAGCAAGATCGCGTTCCCGATCGCGCTCCTGCTCAGGCTCTCGTGTACTTGCCGCGCGATCGAACCGGAAAAGTCTGCAACTTTTCCTGATCTCGCTCTACCGTGCGCGCGNNNNNNNNNNNNNNNNNNNNNCGACGTGGTGCATGACGGCGTCTCGGCCGACGCCGTGCTGACCACTGAAACCTTCGATCTGGTGGTGCTCGACCTCAGCTTGCCGGAGATGGATGGGCTCGATGTGCTGCGCCGCATGCGGGCGCGCCGCAACGCGTCTTCCGTGCTGGTCCTCACTGCTCGCGGCGCACTCGACGAGCGGGTGCGCGGCCTCGATCTCGGCGCCGACGACTACATGACCAAGCCGTTCGAAGTGTCCGAGCTGGAGGCGAGGATCCGCGTGCTGTTGCGCCGGCAGGCCGGCCGGCACAATTCCACCATCGCCTTCGGCAGCATCGAGCTCGATACCGTCTCGCGCACCCTGTCGGCCTTCGGCCAGACCCTCGATATGCCCGCGCGCGAGCTGAGCGTGCTCGAAACCCTGCTGCATCGGGCCGGCAAGGTGGTGGCCAAGCAGTCGATCATCGAATCGCTCGCTGCCTTCGACGACGATCTCAGCGAGAACGCAGTGGAGCAGTACATTTCGCGGCTTCGGCGCCGGCTGGCCCCCTACGCCCTCACCGTGCGCGTCGCCCGCGGGCTCGGCTACTACCTCGATCGGATCGCCGACTGA
PROTEIN sequence
Length: 250
MGNTPRSNQSKIAFPIALLLRLSCTCRAIEPEKSATFPDLALPCAXXXXXXXXDVVHDGVSADAVLTTETFDLVVLDLSLPEMDGLDVLRRMRARRNASSVLVLTARGALDERVRGLDLGADDYMTKPFEVSELEARIRVLLRRQAGRHNSTIAFGSIELDTVSRTLSAFGQTLDMPARELSVLETLLHRAGKVVAKQSIIESLAAFDDDLSENAVEQYISRLRRRLAPYALTVRVARGLGYYLDRIAD*