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SCNPILOT_CONT_300_BF_Rhizobiales_66_14

SCNPILOT_CONT_500_BF_Devosia_66_5
In projects: SCNPILOT_CONT_500_BF

Consensus taxonomy: Devosia  →  Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_cont_500_bf_UNK

Properties

Avg. coverage: 4.79 Longest contig: 18.51 Kbp Bin length: 3.57 Mbp GC content: 65.87 %
Contigs count: 1097 Features count: 4450 rRNAs count: 0 tRNAs count: 19

Genome completeness

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Displaying items 101-150 of 1097 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_500_bf_scaffold_31100
Species: Devosia insulae (50%)
2 1909 bp 67.89 4.06 99.79
SCNpilot_cont_500_bf_scaffold_40444
Species: Devosia psychrophila (50%)
2 1551 bp 68.86 5.16 100.19
SCNpilot_cont_500_bf_scaffold_23982
Species: Devosia geojensis (100%)
2 2338 bp 68.14 5.24 85.20
SCNpilot_cont_500_bf_scaffold_42072
Species: Xanthobacter autotrophicus (50%)
2 2816 bp 65.41 5.06 96.20
SCNpilot_cont_500_bf_scaffold_64181
Species: Devosia insulae (50%)
2 1051 bp 66.70 4.76 82.49
SCNpilot_cont_500_bf_scaffold_46966
Species: Devosia geojensis (50%)
2 1374 bp 66.08 5.46 92.79
SCNpilot_cont_500_bf_scaffold_53487
Species: Bradyrhizobium elkanii (50%)
2 1239 bp 64.73 3.63 85.47
SCNpilot_cont_500_bf_scaffold_47880
Species: Agrobacterium albertimagni (50%)
2 1352 bp 66.27 4.81 88.09
SCNpilot_cont_500_bf_scaffold_30765
Species: Devosia epidermidihirudinis (100%)
2 3104 bp 63.89 4.35 83.41
SCNpilot_cont_500_bf_scaffold_54980
Species: Ensifer adhaerens (50%)
2 1210 bp 66.78 3.31 95.45
SCNpilot_cont_500_bf_scaffold_38680
Species: Agrobacterium rhizogenes (50%)
2 1607 bp 67.83 3.89 94.84
SCNpilot_cont_500_bf_scaffold_41177
Species: Devosia sp. DDB001 (50%)
2 1530 bp 64.97 3.59 90.59
SCNpilot_cont_500_bf_scaffold_46717
Species: Devosia limi (50%)
2 1381 bp 64.16 4.34 98.84
SCNpilot_cont_500_bf_scaffold_29890
Species: Agrobacterium rubi (100%)
2 1972 bp 67.55 4.18 93.26
SCNpilot_cont_500_bf_scaffold_48670
Species: Brevundimonas diminuta (50%)
2 1333 bp 64.82 2.81 94.52
SCNpilot_cont_500_bf_scaffold_53497
Species: Devosia psychrophila (50%)
2 1238 bp 65.02 3.23 81.91
SCNpilot_cont_500_bf_scaffold_43661
Species: Mesorhizobium plurifarium (50%)
2 1459 bp 61.89 3.43 77.52
SCNpilot_cont_500_bf_scaffold_45401
Species: Mesorhizobium australicum (50%)
2 1413 bp 70.49 4.25 100.00
SCNpilot_cont_500_bf_scaffold_39832
Species: Devosia sp. DDB001 (100%)
2 1570 bp 65.03 3.50 95.54
SCNpilot_cont_500_bf_scaffold_27098
Species: Devosia geojensis (50%)
2 2129 bp 65.34 3.29 92.02
SCNpilot_cont_500_bf_scaffold_41443
Species: freshwater metagenome (100%)
2 1521 bp 65.68 4.77 100.20
SCNpilot_cont_500_bf_scaffold_63335
Species: Devosia psychrophila (50%)
2 1065 bp 69.58 3.76 90.42
SCNpilot_cont_500_bf_scaffold_63336
Species: Devosia chinhatensis (50%)
2 1065 bp 64.88 5.63 42.82
SCNpilot_cont_500_bf_scaffold_57673
Species: Devosia geojensis (100%)
2 1161 bp 61.84 3.88 99.48
SCNpilot_cont_500_bf_scaffold_28810
Species: R_Brevundimonas_70_19 (50%)
2 2030 bp 69.61 4.56 94.73
SCNpilot_cont_500_bf_scaffold_22466
Species: Devosia limi (50%)
2 2454 bp 62.31 4.48 78.00
SCNpilot_cont_500_bf_scaffold_49574
Species: Devosia sp. DDB001 (50%)
2 1315 bp 64.49 4.94 72.32
SCNpilot_cont_500_bf_scaffold_26947
Species: Devosia limi (50%)
2 2138 bp 64.03 4.21 81.67
SCNpilot_cont_500_bf_scaffold_46735
Species: Devosia sp. DDB001 (50%)
2 1380 bp 66.59 3.80 79.57
SCNpilot_cont_500_bf_scaffold_38191
Species: Devosia epidermidihirudinis (50%)
2 1623 bp 66.67 4.31 87.62
SCNpilot_cont_500_bf_scaffold_20944
Species: Devosia chinhatensis (50%)
2 2591 bp 63.87 3.09 91.24
SCNpilot_cont_500_bf_scaffold_35928
Species: Devosia sp. DDB001 (100%)
2 1705 bp 66.04 4.40 95.89
SCNpilot_cont_500_bf_scaffold_64724
Species: Rhizobium leguminosarum (50%)
2 1042 bp 65.83 4.80 80.33
SCNpilot_cont_500_bf_scaffold_53773
Species: Sinorhizobium fredii (50%)
2 1232 bp 59.25 3.45 97.65
SCNpilot_cont_500_bf_scaffold_38961
Species: Devosia riboflavina (100%)
2 1597 bp 65.06 3.60 83.78
SCNpilot_cont_500_bf_scaffold_36523
Species: Devosia sp. DDB001 (50%)
2 1683 bp 62.75 4.90 88.41
SCNpilot_cont_500_bf_scaffold_30284
Species: Devosia sp. LC5 (50%)
2 1951 bp 64.63 3.08 96.26
SCNpilot_cont_500_bf_scaffold_47912
Species: Rhizobium sp. CF142 (50%)
2 1351 bp 68.84 4.44 80.83
SCNpilot_cont_500_bf_scaffold_54755
Species: Devosia sp. DDB001 (50%)
2 1215 bp 66.42 5.76 90.62
SCNpilot_cont_500_bf_scaffold_36016
Species: Devosia sp. DDB001 (50%)
2 1702 bp 71.21 3.67 94.83
SCNpilot_cont_500_bf_scaffold_37730
Species: Devosia sp. DDB001 (100%)
2 2502 bp 65.79 5.00 98.68
SCNpilot_cont_500_bf_scaffold_42628
Species: Mesorhizobium sp. ORS3359 (50%)
2 1486 bp 67.83 4.37 95.69
SCNpilot_cont_500_bf_scaffold_52456
Species: Pelagibacterium halotolerans (50%)
2 1256 bp 66.72 5.18 91.48
SCNpilot_cont_500_bf_scaffold_48706
Species: Devosia geojensis (50%)
2 1332 bp 67.57 4.13 78.15
SCNpilot_cont_500_bf_scaffold_42376
Species: Devosia sp. DDB001 (50%)
2 1493 bp 64.97 5.86 95.04
SCNpilot_cont_500_bf_scaffold_58036
Species: Devosia sp. DDB001 (50%)
2 1155 bp 65.54 2.60 98.96
SCNpilot_cont_500_bf_scaffold_39353
Species: Devosia sp. DDB001 (50%)
2 1585 bp 65.74 3.94 93.12
SCNpilot_cont_500_bf_scaffold_25107
Species: Devosia soli (50%)
2 2255 bp 66.12 3.77 97.38
SCNpilot_cont_500_bf_scaffold_49343
Species: Rhizobium sp. CF142 (50%)
2 1319 bp 63.00 3.41 75.28
SCNpilot_cont_500_bf_scaffold_32260
Species: Devosia sp. DDB001 (100%)
2 1857 bp 68.07 5.92 100.16
Displaying items 101-150 of 1097 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.