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SCNpilot_cont_500_bf_scaffold_8725_4

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

partial RP 29 / 55 MC: 1 BSCG 32 / 51 MC: 2 ASCG 9 / 38
Location: comp(3063..4436)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirD4 component n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUP5_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 449.0
  • Bit_score: 743
  • Evalue 9.30e-212
  • rbh
type IV secretory pathway VirD4 components; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 449.0
  • Bit_score: 743
  • Evalue 2.90e-212
  • rbh
Type IV secretory pathway VirD4 component {ECO:0000313|EMBL:ABA03996.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 449.0
  • Bit_score: 743
  • Evalue 1.30e-211

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Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1374
ATGAAGCATCCCAGCGAATACAAAAATCTACGCAAAGGTATTGAGCTCGGCTTCTTTAACAAGAAGCCGATTGTCTATGGCGGCACCGAACCTGTCGCCATTGATGCGCAGGCGGGCAAAGGCAAGCTCACACGGTTCCTCGGTGTCAACCTGGTCTCACCGCGCACGGCGCATCTGACCAAAATCATCACTGATCCGAAAGATGGAGAGCTTGCCTGGGTGTCCTGGAAGACGCTTGAACGCCAAGGCTATCAGGTCCGATTTATCAATCCCGGCAATCTCTATAGCTATCGCACAGACAGCTACAACATTAATACCCGCGTCATTGAGATTGCCGCGCGACCTGACCTCTACGGCATTTTGAACGAAGCGGCTTATGATGCTGCCAGCTATCTTGTGCCGATTGATCCCAACCCTGCGCATCGGTGGATCGGGCAAGGCGTTCGCTCTGCTTTTGCGCTCTACAATAAGATTACAGCGCGATTCCCAACGACGCGTTGGCCTTGCACACCTGGCGGGCTCTGGGACTTTTACGGACGTGCTGCCTATGAGATTGCCGATGATCTTTTGCTTTGGGCCAGTGATAACCGCCTGGAAGATGACTCCGGCATGTGCAGGCAAATTGCAGGCCTGACTGCCTCAACCGATCAATGGACTGCCTACTCCTCTCTCATCATCGAAAGGCTGCAAGCCTTTCAGCCTGGTGCAGCGGCACGTGGTGTTACCGAGCGCAACACATTCGATCCGGCTGAAATGAAGTCCACGCCAACTGCGCTTTTCATCATTGGATCGGCAACTTCAGAGAGTAGCCGAAGTTTTGTCGGCGCGATGATAGCAGCGATTGTGCAGCGGTTTGTGACCGCGCACGGTCCGCTGCGCGCGCTCGTCGTGGGCGAAGAATGGGGACAGCTATATGTCTCCAACTTCCATGAAATCCTGACGCTCTACCGCGAAGGCGGTATCAATTTTCTGGGCGTGTTTCAGAACGCCGCCGCACAAATTGAATCGCGCTATGGCCGGGAAACATCGCGGCTCTGGAAAAAGGCCGTGGCCCATACGCTCTATCGCGGTCTGCCCGACGATCAGACGCTCAAAGACATCGAGCACCGCTCAGGCAAAACCTCTGTCATGGTGCGAGGCTTCAACGTCAACAACAACCAGGTCAACGGTTCCGGCGACAACCTCGTGGAGCAGTCGCGCCCGCTCTTACAAGTGGAAGATATTCGCCCGGCCACAGGTGGCATCAAGGCTCTGCTGGAATCCCGTGATCAAGGATTTTTCACGGTGGAGATGCCGAATTTTTGGGAACGGCCCGAGCTAACAGGTCTGCTGCGCGATGTGCGCGAAAAGCCCGAAAGGTATATTTTAGTATAG
PROTEIN sequence
Length: 458
MKHPSEYKNLRKGIELGFFNKKPIVYGGTEPVAIDAQAGKGKLTRFLGVNLVSPRTAHLTKIITDPKDGELAWVSWKTLERQGYQVRFINPGNLYSYRTDSYNINTRVIEIAARPDLYGILNEAAYDAASYLVPIDPNPAHRWIGQGVRSAFALYNKITARFPTTRWPCTPGGLWDFYGRAAYEIADDLLLWASDNRLEDDSGMCRQIAGLTASTDQWTAYSSLIIERLQAFQPGAAARGVTERNTFDPAEMKSTPTALFIIGSATSESSRSFVGAMIAAIVQRFVTAHGPLRALVVGEEWGQLYVSNFHEILTLYREGGINFLGVFQNAAAQIESRYGRETSRLWKKAVAHTLYRGLPDDQTLKDIEHRSGKTSVMVRGFNVNNNQVNGSGDNLVEQSRPLLQVEDIRPATGGIKALLESRDQGFFTVEMPNFWERPELTGLLRDVREKPERYILV*