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SCNpilot_cont_500_bf_scaffold_39003_3

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

partial RP 29 / 55 MC: 1 BSCG 32 / 51 MC: 2 ASCG 9 / 38
Location: 1119..1595

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 159.0
  • Bit_score: 274
  • Evalue 1.30e-70
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 157.0
  • Bit_score: 227
  • Evalue 4.20e-57
tRNA pseudouridine synthase B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R997_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 157.0
  • Bit_score: 227
  • Evalue 1.30e-56

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
GTGACGCAGCCCAGATCCAAAAAGCGCCCCATCTCCGGGTGGGTGGTGCTGTCAAAGCCCTATGACATGACCTCCACCCAGGCGGTGGGCAAGGTCCGCTGGCTGTTTTCCGCTGCCAAGGCAGGCCATGCCGGTACACTCGACCCGCTGGCCACCGGCATCCTCCCCATCGCTCTCGGTGAGGCTACCAAGGCCGTGCCGCAGGTGCAGGATGGTACAAAAATCTACCGCTTCGCCATTCAATGGGGCAGCTCCACCAGCACCGACGATGCCGAAGGCGAGGTGATCGCCACTTCCGACCACCGCCCTGAGCAGGCCGACCTGGAAGCGGTGCTGCCGCGCTTTACCGGCACCATCATGCAGCGTCCTCCGGCTTTTTCGGCGATCAAGGTCGATGGCGAGCGTGCCTATGACCTGGCGCGCGCCGGTGAAATCGTCGAACTGGCTGAGCGGCCGATCGATATCGACGCCATCGCG
PROTEIN sequence
Length: 159
VTQPRSKKRPISGWVVLSKPYDMTSTQAVGKVRWLFSAAKAGHAGTLDPLATGILPIALGEATKAVPQVQDGTKIYRFAIQWGSSTSTDDAEGEVIATSDHRPEQADLEAVLPRFTGTIMQRPPAFSAIKVDGERAYDLARAGEIVELAERPIDIDAIA