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SCNpilot_cont_500_bf_scaffold_15564_4

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: 4533..4949

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas sp. CF161 RepID=S6J8S8_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 131.0
  • Bit_score: 163
  • Evalue 1.20e-37
LysR family transcriptional regulator {ECO:0000313|EMBL:EPL10614.1}; TaxID=911241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF161.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 131.0
  • Bit_score: 163
  • Evalue 1.70e-37
HTH-type transcriptional regulator HI similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 131.0
  • Bit_score: 159
  • Evalue 9.30e-37

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Taxonomy

Pseudomonas sp. CF161 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGCAGAGGGCCATTCGAAAGAGCGACGATCTGGGCGAGATTGGTGTGTTCGTGCAGGTCGCGGAGACTCGCAGCTTCGTCGAGGCCGGCCGGCGCCTCGGCGTCTCCGCCTCCGCCGTCGGCAAGAGTATTGCTCGGCTCGAGGAGCGCTTCGGCACTCGCCTCTTCCACCGCACGACGCGTAGGGTCTCGCTTACCGAAGACGGCGCGCGCTTCCTCGTACGCTGTACGCGGATCGTCGAGGAGCTCGAGGGGGCCGAACTCGACTTCGCGCGCGGACACGATGCGCCTCGCGGCCGACTGCGCGTCGCCCTGCCGACGGCGAACGCATTCTTTTCCCCGCTATTGGCCGAGTTCTCCCGCGAGTACCCGGGCGTCGAGCTCGACGTCGAGCTCGGCGATCGCCTCGTCGATCTC
PROTEIN sequence
Length: 139
MQRAIRKSDDLGEIGVFVQVAETRSFVEAGRRLGVSASAVGKSIARLEERFGTRLFHRTTRRVSLTEDGARFLVRCTRIVEELEGAELDFARGHDAPRGRLRVALPTANAFFSPLLAEFSREYPGVELDVELGDRLVDL