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SCNpilot_cont_500_bf_scaffold_24405_4

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: comp(2067..2285)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator of zinc sigma-54-dependent two-component system {ECO:0000313|EMBL:AKF03131.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 72.0
  • Bit_score: 75
  • Evalue 3.20e-11
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) id=4679571 bin=GWC2_Pelobacter_58_13 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 71.0
  • Bit_score: 70
  • Evalue 9.50e-10
diguanylate cyclase (GGDEF) domain similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 69.0
  • Bit_score: 66
  • Evalue 3.30e-09

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Taxonomy

Sandaracinus amylolyticus → Sandaracinus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 219
ATGACCCTCATCCGTGGAATCGAGGCGTCGACGGTGAAGAAGCACGTCGTCGAGTCGATGACGCGCCTCTGTCGCGAGCTCGACATGAAGGTCGTCGCCGAGGGCATCGAGACTATGCCGGAGCTCGCGACGATCATCGACCTCGGCTGCGACTACTTGCAGGGCTACTTGCTCGGTCGCCCGGGCCCCGCGCTCGTCCCCTCGTCCCAGACCTGGTAA
PROTEIN sequence
Length: 73
MTLIRGIEASTVKKHVVESMTRLCRELDMKVVAEGIETMPELATIIDLGCDYLQGYLLGRPGPALVPSSQTW*